3MLE: Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori cocrystallized with ATP

PDB ID: 3MLEDownload
MMDB ID: 82229
PDB Deposition Date: 2010/4/16
Updated in MMDB: 2023/09
Experimental Method:
x-ray diffraction
Resolution: 2.8  Å
Source Organism:
Similar Structures:
Biological Unit for 3MLE: dimeric; determined by author and by software (PISA)
Molecular Components in 3MLE
Label Count Molecule
Proteins (2 molecules)
2
Dethiobiotin Synthetase
(Gene symbol: HP0029)
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
2
PHOSPHATE IONPHOSPHATE ION
2
2
MAGNESIUM IONMAGNESIUM ION
3
1
NITRATE IONNITRATE ION
4
2
CHLORIDE IONCHLORIDE ION
5
2
8-aminooctanoic acid8-aminooctanoic acid
6
4
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303