3MBJ: Crystal structure of a putative phosphomethylpyrimidine kinase (BT_4458) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution (rhombohedral form)

PDB ID: 3MBJDownload
MMDB ID: 82074
PDB Deposition Date: 2010/3/25
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 2.1  Å
Source Organism:
Similar Structures:
Biological Unit for 3MBJ: hexameric; determined by author and by software (PISA)
Molecular Components in 3MBJ
Label Count Molecule
Proteins (6 molecules)
6
Putative Phosphomethylpyrimidine Kinase
(Gene symbol: BT_4458)
Molecule annotation
Chemicals and Non-standard biopolymers (59 molecules)
1
11
ZINC IONZINC ION
2
6
CHLORIDE IONCHLORIDE ION
3
12
SULFATE IONSULFATE ION
4
6
IMIDAZOLEIMIDAZOLE
5
12
(4S)-2-METHYL-2,4-PENTANEDIOL(4S)-2-METHYL-2,4-PENTANEDIOL
6
12
(4R)-2-METHYLPENTANE-2,4-DIOL(4R)-2-METHYLPENTANE-2,4-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303