3LDB: Structure of JMJD6 complexd with ALPHA-KETOGLUTARATE and Fab Fragment

PDB ID: 3LDBDownload
MMDB ID: 83823
PDB Deposition Date: 2010/1/12
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 2.7  Å
Source Organism:
Nothocricetulus migratorius▼
Similar Structures:
Biological Unit for 3LDB: trimeric; determined by author
Molecular Components in 3LDB
Label Count Molecule
Proteins (3 molecules)
1
Bifunctional Arginine Demethylase and Lysyl-hydroxylase Jmjd6
Molecule annotation
1
Antibody FAB Fragment Light Chain
Molecule annotation
1
Antibody FAB Fragment Heavy Chain
Molecule annotation
Chemicals and Non-standard biopolymers (28 molecules)
1
5
GLYCEROLGLYCEROL
2
19
SULFATE IONSULFATE ION
3
1
2-OXOGLUTARIC ACID2-OXOGLUTARIC ACID
4
1
FE (III) IONFE (III) ION
5
2
MERCURY (II) IONMERCURY (II) ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303