3KD1: Closed binary complex of an RB69 gp43 fingers domain mutant complexed with an acyclic GMP terminated primer template pair

PDB ID: 3KD1Download
MMDB ID: 89818
PDB Deposition Date: 2009/10/22
Updated in MMDB: 2021/10
Experimental Method:
x-ray diffraction
Resolution: 2.66  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3KD1: trimeric; determined by author and by software (PISA)
Molecular Components in 3KD1
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*cp*gp*tp*cp*tp*tp*ap*tp*gp*ap*cp*ap*gp*cp*cp*gp*cp*g)-3')
Molecule annotation
1
DNA (5'-d(*gp*cp*gp*gp*cp*tp*gp*tp*cp*ap*tp*ap*ap*(4dg))-3')
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
MAGNESIUM IONMAGNESIUM ION
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Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303