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3J8D:
Cryoelectron microscopy of dengue-Fab E104 complex at pH 5.5
PDB ID:
3J8D
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MMDB ID:
124610
PDB Deposition Date:
2014/10/13
Updated in MMDB:
2014/11
Experimental Method:
electron microscopy
Resolution:
26 Å
Source Organism:
Dengue virus 2 Thailand/16681/84
▼
Taxonomy
Molecule
Dengue virus 2 Thailand/16681/84
B, F, G, H, I
Mus musculus
A, D
Similar Structures:
VAST+
Download sequence data
Biological Unit for 3J8D: 420-meric
Molecular Components in 3J8D
Label
Count
Molecule
Proteins (420 molecules)
B
F
B_1
B_2
B_3
B_4
B_5
B_6
B_7
B_8
B_9
B_10
B_11
B_12
B_13
B_14
B_15
B_16
B_17
B_18
B_19
B_20
B_21
B_22
B_23
B_24
B_25
B_26
B_27
B_28
…
120
Glycoprotein Diii
A
D
A_1
A_2
A_3
A_4
A_5
A_6
A_7
A_8
A_9
A_10
A_11
A_12
A_13
A_14
A_15
A_16
A_17
A_18
A_19
A_20
A_21
A_22
A_23
A_24
A_25
A_26
A_27
A_28
…
120
Antibody E111 FAB Fragment
G
H
I
G_1
G_2
G_3
G_4
G_5
G_6
G_7
G_8
G_9
G_10
G_11
G_12
G_13
G_14
G_15
G_16
G_17
G_18
G_19
G_20
G_21
G_22
G_23
G_24
G_25
G_26
G_27
…
180
Envelope Protein E
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303