3IGU: Crystal structure of human alpha-N-acetylgalactosaminidase, covalent intermediate

PDB ID: 3IGUDownload
MMDB ID: 77537
PDB Deposition Date: 2009/7/28
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 2.15  Å
Source Organism:
Similar Structures:
Biological Unit for 3IGU: dimeric; determined by author and by software (PISA)
Molecular Components in 3IGU
Label Count Molecule
Proteins (2 molecules)
2
Alpha-n-acetylgalactosaminidase
(Gene symbol: NAGA)
Molecule annotation
Chemicals and Non-standard biopolymers (34 molecules)
1
10
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
3
4
alpha-D-mannopyranosealpha-D-mannopyranose
4
1
alpha-L-fucopyranosealpha-L-fucopyranose
5
15
GLYCEROLGLYCEROL
6
2
2-deoxy-2,2-difluoro-beta-D-lyxo-hexopyranose2-deoxy-2,2-difluoro-beta-D-lyxo-hexopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303