3HXM: Structure of an argonaute complexed with guide DNA and target RNA duplex containing two mismatches

PDB ID: 3HXMDownload
MMDB ID: 77192
PDB Deposition Date: 2009/6/21
Updated in MMDB: 2009/10
Experimental Method:
x-ray diffraction
Resolution: 3.1  Å
Source Organism:
Thermus thermophilus HB27▼
Similar Structures:
Biological Unit for 3HXM: trimeric; determined by author and by software (PISA)
Molecular Components in 3HXM
Label Count Molecule
Protein (1 molecule)
1
Argonaute
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(p*tp*gp*ap*gp*gp*tp*ap*gp*tp*ap*gp*gp*tp*tp*gp*tp*ap*tp*ap*gp*t)-3')
Molecule annotation
1
RNA (5'-r(*up*ap*up*ap*cp*ap*ap*cp*up*cp*ap*cp*up*ap*cp*cp*up*cp*gp*u)-3')
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303