3HRD: Crystal Structure Of Nicotinate Dehydrogenase

PDB ID: 3HRDDownload
MMDB ID: 75023
PDB Deposition Date: 2009/6/9
Updated in MMDB: 2009/07
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 3HRD: octameric; determined by author and by software (PISA)
Molecular Components in 3HRD
Label Count Molecule
Proteins (8 molecules)
2
Nicotinate Dehydrogenase Large Molybdopterin Subunit
Molecule annotation
2
Nicotinate Dehydrogenase Medium Molybdopterin Subunit
Molecule annotation
2
Nicotinate Dehydrogenase Fad-subunit
Molecule annotation
2
Nicotinate Dehydrogenase Small FES Subunit
Molecule annotation
Chemicals and Non-standard biopolymers (20 molecules)
1
2
Selenium AtomSelenium Atom
2
3
Nitrate IonNitrate Ion
3
2
Magnesium IonMagnesium Ion
4
2
Dioxothiomolybdenum(vi) IonDioxothiomolybdenum(vi) Ion
5
2
Pterin Cytosine DinucleotidePterin Cytosine Dinucleotide
6
2
Nicotinic AcidNicotinic Acid
7
2
Flavin-adenine DinucleotideFlavin-adenine Dinucleotide
8
4
Fe2/s2 (inorganic) ClusterFe2/s2 (inorganic) Cluster
9
1
Calcium IonCalcium Ion
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303