3HP6: Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus F710Y mutant bound to G:T mismatch

PDB ID: 3HP6Download
MMDB ID: 82905
PDB Deposition Date: 2009/6/3
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 1.81  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3HP6: trimeric; determined by author and by software (PISA)
Molecular Components in 3HP6
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase I, Large Fragment
Molecule annotation
Nucleotides(2 molecules)
1
5'-d(*cp*gp*ap*tp*cp*ap*cp*gp*(ddg))-3'
Molecule annotation
1
5'-d(*ap*cp*gp*cp*cp*gp*tp*gp*ap*tp*cp*g)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
alpha-D-glucopyranosealpha-D-glucopyranose
2
2
beta-D-fructofuranosebeta-D-fructofuranose
3
1
SULFATE IONSULFATE ION
4
1
2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303