NCBI
National Center for
Biotechnology Information
Search
3GV5:
Human DNA polymerase iota in complex with T template DNA and incoming ddADP
PDB ID:
3GV5
Download
MMDB ID:
73061
PDB Deposition Date:
2009/3/30
Updated in MMDB:
2012/12
Experimental Method:
x-ray diffraction
Resolution:
2 Å
Source Organism:
Homo sapiens
▼
Taxonomy
Molecule
Homo sapiens
B, D
Unassigned
P, T, E, F
Similar Structures:
VAST+
Download sequence data
Biological Unit for 3GV5: trimeric; determined by author and by software (PISA)
Molecular Components in 3GV5
Label
Count
Molecule
Protein (1 molecule)
B
1
DNA Polymerase Iota
Nucleotides(2 molecules)
P
1
5'-d(*gp*tp*gp*gp*ap*tp*gp*ap*g)-3'
T
1
5'-d(p*cp*ap*tp*tp*cp*tp*cp*ap*tp*cp*cp*ap*c)-3'
Chemicals and Non-standard biopolymers (6 molecules)
1
4
CALCIUM ION
2
1
GLYCEROL
3
1
2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303