3GS8: An All-Rna Hairpin Ribozyme A38n1da38 Variant With A Transition-State Mimic Substrate Strand

PDB ID: 3GS8Download
MMDB ID: 71026
PDB Deposition Date: 2009/3/26
Updated in MMDB: 2011/05
Experimental Method:
x-ray diffraction
Resolution: 2.85  Å
Source Organism:
Biological Unit for 3GS8: tetrameric; determined by author
Molecular Components in 3GS8
Label Count Molecule
Nucleotides(4 molecules)
1
RNA (5'- R(*up*cp*cp*cp*ap*gp*up*cp*cp*ap*cp*cp*gp*u)-3')
Molecule annotation
1
RNA (5'-r(*cp*gp*gp*up*gp*ap*gp*ap*ap*gp*gp*g)- 3')
Molecule annotation
1
RNA (5'- R(p*gp*gp*cp*ap*gp*ap*gp*ap*ap*ap*cp*ap*cp*ap*cp*gp*a)-3')
Molecule annotation
1
RNA (5'- R(*up*cp*gp*up*gp*gp*up*ap*cp*ap*up*up*ap*cp*cp*up*gp*cp*c) -3')
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
1
2-[2-(2-hydroxyethoxy)ethoxy]ethyl Dihydrogen Phosphate2-[2-(2-hydroxyethoxy)ethoxy]ethyl Dihydrogen Phosphate
2
2
Cobalt Hexammine(iii)Cobalt Hexammine(iii)
3
1
Sulfate IonSulfate Ion
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303