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3GPL:
Crystal structure of the ternary complex of RecD2 with DNA and ADPNP
PDB ID:
3GPL
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MMDB ID:
73357
PDB Deposition Date:
2009/3/23
Updated in MMDB:
2023/09
Experimental Method:
x-ray diffraction
Resolution:
2.5 Å
Source Organism:
Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539
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Taxonomy
Molecule
Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539
A, B
synthetic construct
X, Y
Similar Structures:
VAST+
Download sequence data
Biological Unit for 3GPL: dimeric; determined by author and by software (PISA)
Molecular Components in 3GPL
Label
Count
Molecule
Protein (1 molecule)
A
1
Exodeoxyribonuclease V, Subunit Recd, Putative
Nucleotide(1 molecule)
X
1
5'-d(*t*tp*tp*tp*tp*tp*tp*t)-3'
Chemicals and Non-standard biopolymers (2 molecules)
1
1
MAGNESIUM ION
2
1
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303