3GP9: Crystal structure of the Mimivirus NDK complexed with GDP

PDB ID: 3GP9Download
MMDB ID: 75924
PDB Deposition Date: 2009/3/23
Updated in MMDB: 2023/09
Experimental Method:
x-ray diffraction
Resolution: 1.8  Å
Source Organism:
Similar Structures:
Biological Unit for 3GP9: hexameric; determined by author
Molecular Components in 3GP9
Label Count Molecule
Proteins (6 molecules)
6
Nucleoside Diphosphate Kinase
(Gene symbol: R418)
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
6
GUANOSINE-5'-DIPHOSPHATEGUANOSINE-5'-DIPHOSPHATE
2
6
PHOSPHATE IONPHOSPHATE ION
3
6
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303