3DYF: T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-461 and Isopentyl Diphosphate

PDB ID: 3DYFDownload
MMDB ID: 72446
PDB Deposition Date: 2008/7/27
Updated in MMDB: 2011/05
Experimental Method:
x-ray diffraction
Resolution: 2.65  Å
Source Organism:
Similar Structures:
Biological Unit for 3DYF: dimeric; determined by author and by software (PISA)
Molecular Components in 3DYF
Label Count Molecule
Proteins (2 molecules)
2
Farnesyl Pyrophosphate Synthase
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
6
MAGNESIUM IONMAGNESIUM ION
2
1
ACETATE IONACETATE ION
3
2
3-FLUORO-1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL)PYRIDINIUM3-FLUORO-1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL)PYRIDINIUM
4
2
ISOPENTYL PYROPHOSPHATEISOPENTYL PYROPHOSPHATE
5
1
(4S)-2-METHYL-2,4-PENTANEDIOL(4S)-2-METHYL-2,4-PENTANEDIOL
6
1
BETA-MERCAPTOETHANOLBETA-MERCAPTOETHANOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303