3DDI: Crystal structure of the mimivirus NDK +Kpn-N62L-R107G triple mutant complexed with TDP

PDB ID: 3DDIDownload
MMDB ID: 73293
PDB Deposition Date: 2008/6/5
Updated in MMDB: 2021/10
Experimental Method:
x-ray diffraction
Resolution: 1.9  Å
Source Organism:
Similar Structures:
Biological Unit for 3DDI: hexameric; determined by author
Molecular Components in 3DDI
Label Count Molecule
Proteins (6 molecules)
6
Nucleoside Diphosphate Kinase
(Gene symbol: R418)
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
4
MAGNESIUM IONMAGNESIUM ION
2
6
THYMIDINE-5'-DIPHOSPHATETHYMIDINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303