3ARD: Ternary crystal structure of the mouse NKT TCR-CD1d-3'deoxy-alpha-galactosylceramide

PDB ID: 3ARDDownload
MMDB ID: 89501
PDB Deposition Date: 2010/11/27
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 3.01  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3ARD: tetrameric; determined by author
Molecular Components in 3ARD
Label Count Molecule
Proteins (4 molecules)
1
Antigen-presenting Glycoprotein Cd1d1
Molecule annotation
1
Beta-2-microglobulin
Molecule annotation
1
NKT Valpha14-jalpha18,nkt Valpha14-jalpha18
Molecule annotation
1
Vbeta8.2,vbeta8.2
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
6
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
N-{(2S,3R)-1-[(3-deoxy-alpha-D-xylo-hexopyranosyl)oxy]-3-hydroxyoctadecan-2-yl}hexacosanamideN-{(2S,3R)-1-[(3-deoxy-alpha-D-xylo-hexopyranosyl)oxy]-3-hydroxyoctadecan-2-yl}hexacosanamide
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303