3AJK: Crystal structure of d(CGCGGATf5UCGCG): 5-Formyluridine:Guanosine Base-pair in B-DNA with Hoechst33258

PDB ID: 3AJKDownload
MMDB ID: 90113
PDB Deposition Date: 2010/6/7
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 1.95  Å
Source Organism:
Biological Unit for 3AJK: dimeric; determined by author and by software (PISA)
Molecular Components in 3AJK
Label Count Molecule
Nucleotides(2 molecules)
2
5'-d(*cp*gp*cp*gp*gp*ap*tp*(ufr)p*cp*gp*cp*g*)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE
2
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303