3AFR: Crystal Structure of VDR-LBD/22S-Butyl-1a,24R-dihydroxyvitamin D3 complex

PDB ID: 3AFRDownload
MMDB ID: 81071
PDB Deposition Date: 2010/3/10
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Rattus norvegicus▼
Similar Structures:
Biological Unit for 3AFR: dimeric; determined by author and by software (PISA)
Molecular Components in 3AFR
Label Count Molecule
Proteins (2 molecules)
1
Vitamin D3 Receptor
Molecule annotation
1
13-meric Peptide From Mediator of RNA Polymerase II Transcription Subunit 1
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
(1R,3S,5Z)-5-[(2E)-2-{(1R,3aS,7aR)-1-[(1R,2S,4R)-2-butyl-4-hydroxy-1,5-dimethylhexyl]-7a-methyloctahydro-4H-inden-4-yli dene}ethylidene]-4-methylidenecyclohexane-1,3-diol(1R,3S,5Z)-5-[(2E)-2-{(1R,3aS,7aR)-1-[(1R,2S,4R)-2-butyl-4-hydroxy-1,5-dimethylhexyl]-7a-methyloctahydro-4H-inden-4-yli dene}ethylidene]-4-methylidenecyclohexane-1,3-diol
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303