357D: 3.5 A structure of fragment I from E. coli 5S RRNA

PDB ID: 357DDownload
MMDB ID: 87030
PDB Deposition Date: 1997/10/9
Updated in MMDB: 2010/12
Experimental Method:
x-ray diffraction
Resolution: 3.5  Å
Source Organism:
Biological Unit for 357D: trimeric; determined by author and by software (PISA)
Molecular Components in 357D
Label Count Molecule
Nucleotides(2 molecules)
1
RNA (5'-r(*cp*cp*gp*ap*up*gp*gp*up*ap*gp*up*gp*up*gp*gp*gp*g*up*c)-3')
Molecule annotation
1
RNA (5'-r(*cp*cp*cp*cp*ap*up*gp*cp*gp*ap*gp*ap*gp*up*ap*gp*g P*gp*ap*ap*cp*up* Gp*cp*cp*ap*gp*gp*cp*ap*u)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
A
1
RNA-DNA (5'-R(*UP*GP*DCP)-D(*CP(S)*)-R(*UP*GP*GP*CP*GP*GP*C)-3')
1
8
MAGNESIUM IONMAGNESIUM ION
2
1
MERCURY (II) IONMERCURY (II) ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303