2YL8: Inhibition of the pneumococcal virulence factor StrH and molecular insights into N-glycan recognition and hydrolysis

PDB ID: 2YL8Download
MMDB ID: 93427
PDB Deposition Date: 2011/5/31
Updated in MMDB: 2011/11
Experimental Method:
x-ray diffraction
Resolution: 1.75  Å
Source Organism:
Similar Structures:
Biological Unit for 2YL8: monomeric; determined by author and by software (PISA)
Molecular Components in 2YL8
Label Count Molecule
Protein (1 molecule)
1
Beta-n-acetylhexosaminidase
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
1
alpha-D-mannopyranosealpha-D-mannopyranose
2
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
3
9
MANGANESE (II) IONMANGANESE (II) ION
4
2
POLYETHYLENE GLYCOL (N=34)POLYETHYLENE GLYCOL (N=34)
5
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303