2YI1: Crystal structure of N-Acetylmannosamine kinase in complex with N- acetyl mannosamine 6-phosphate and ADP

PDB ID: 2YI1Download
MMDB ID: 97554
PDB Deposition Date: 2011/5/10
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.15  Å
Source Organism:
Similar Structures:
Biological Unit for 2YI1: dimeric; determined by author and by software (PISA)
Molecular Components in 2YI1
Label Count Molecule
Proteins (2 molecules)
2
Bifunctional Udp-n-acetylglucosamine 2-epimerase/n-acetylmannosamine Kinase
(Gene symbol: GNE)
Molecule annotation
Chemicals and Non-standard biopolymers (28 molecules)
1
2
2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranose2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranose
2
2
2-acetamido-2-deoxy-alpha-D-mannopyranose2-acetamido-2-deoxy-alpha-D-mannopyranose
3
2
MAGNESIUM IONMAGNESIUM ION
4
4
CALCIUM IONCALCIUM ION
5
2
NONAETHYLENE GLYCOLNONAETHYLENE GLYCOL
6
2
TETRAETHYLENE GLYCOLTETRAETHYLENE GLYCOL
7
8
1,2-ETHANEDIOL1,2-ETHANEDIOL
8
2
ACETATE IONACETATE ION
9
2
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
10
2
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303