2YCM: Inhibitors of herbicidal target IspD

PDB ID: 2YCMDownload
MMDB ID: 92840
PDB Deposition Date: 2011/3/16
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.8  Å
Source Organism:
Similar Structures:
Biological Unit for 2YCM: dimeric; determined by author and by software (PISA)
Molecular Components in 2YCM
Label Count Molecule
Proteins (2 molecules)
2
2-c-methyl-d-erythritol 4-phosphate Cytidylyltransferase, Chloroplastic
(Gene symbol: ISPD)
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
6
CADMIUM IONCADMIUM ION
2
2
SODIUM IONSODIUM ION
3
2
COPPER (II) IONCOPPER (II) ION
4
2
6-BENZYL-5-CHLORO-7-HYDROXYPYRAZOLO[1,5-A]PYRIMIDINE-3-CARBOXYLIC ACID6-BENZYL-5-CHLORO-7-HYDROXYPYRAZOLO[1,5-A]PYRIMIDINE-3-CARBOXYLIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303