2XY3: Structure of the Bacillus subtilis prophage dUTPase with dUpNHpp

PDB ID: 2XY3Download
MMDB ID: 88771
PDB Deposition Date: 2010/11/12
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.55  Å
Source Organism:
Similar Structures:
Biological Unit for 2XY3: trimeric; determined by author and by software (PISA)
Molecular Components in 2XY3
Label Count Molecule
Proteins (3 molecules)
3
Spbc2 Prophage-derived Deoxyuridine 5'-triphosphate Nucleotidohydrolase Yoss
(Gene symbol: dutB)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
4
2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE
2
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303