2XVK: crystal structure of alpha-xylosidase (GH31) from Cellvibrio japonicus in complex with 5-fluoro-alpha-D-xylopyranosyl fluoride

PDB ID: 2XVKDownload
MMDB ID: 89783
PDB Deposition Date: 2010/10/26
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.503  Å
Source Organism:
Similar Structures:
Biological Unit for 2XVK: monomeric; determined by author and by software (PISA)
Molecular Components in 2XVK
Label Count Molecule
Protein (1 molecule)
1
Alpha-xylosidase, Putative, Xyl31a
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
4
CHLORIDE IONCHLORIDE ION
2
1
NICKEL (II) IONNICKEL (II) ION
3
1
(2R,3S,5R,6S)-2,6-DIFLUOROOXANE-3,4,5-TRIOL(2R,3S,5R,6S)-2,6-DIFLUOROOXANE-3,4,5-TRIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303