2VQE: Modified Uridines With C5-methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-g Wobble Pairing During Decoding

PDB ID: 2VQEDownload
MMDB ID: 64143
PDB Deposition Date: 2008/3/13
Updated in MMDB: 2017/07
Experimental Method:
x-ray diffraction
Resolution: 2.5  Å
Source Organism:
Similar Structures:
Biological Unit for 2VQE: 23-meric; determined by author and by software (PQS)
Molecular Components in 2VQE
Label Count Molecule
Proteins (20 molecules)
1
30S Ribosomal Protein S2(Gene symbol: rpsB)
Molecule annotation
1
30S Ribosomal Protein S3(Gene symbol: rpsC)
Molecule annotation
1
30S Ribosomal Protein S4(Gene symbol: rpsD)
Molecule annotation
1
30S Ribosomal Protein S5(Gene symbol: rpsE)
Molecule annotation
1
30S Ribosomal Protein S6(Gene symbol: rpsF)
Molecule annotation
1
30S Ribosomal Protein S7(Gene symbol: TTHA1696)
Molecule annotation
1
30S Ribosomal Protein S8
Molecule annotation
1
30S Ribosomal Protein S9
Molecule annotation
1
30S Ribosomal Protein S10(Gene symbol: rpsJ)
Molecule annotation
1
30S Ribosomal Protein S11(Gene symbol: TTHA1666)
Molecule annotation
1
30S Ribosomal Protein S12(Gene symbol: rpsL)
Molecule annotation
1
30S Ribosomal Protein S13(Gene symbol: rpsM)
Molecule annotation
1
30S Ribosomal Protein S14 Type Z
Molecule annotation
1
30S Ribosomal Protein S15(Gene symbol: rpsO)
Molecule annotation
1
30S Ribosomal Protein S16(Gene symbol: rpsP)
Molecule annotation
1
30S Ribosomal Protein S17
Molecule annotation
1
30S Ribosomal Protein S18
Molecule annotation
1
30S Ribosomal Protein S19(Gene symbol: rpsS)
Molecule annotation
1
30S Ribosomal Protein S20
Molecule annotation
1
30S Ribosomal Protein THX(Gene symbol: TTHA1396)
Molecule annotation
Nucleotides(3 molecules)
1
16S rRNA
Molecule annotation
1
5'-r(*up*up*ap*ap*ap*ap)-3'
Molecule annotation
1
5'-r(*gp*cp*ap*up*gp*cp*up*tm2p*ap*ap*ap *ap*cp*ap*up*gp*cp)-3'
Molecule annotation
Chemicals (271 molecules)
1
206
2
62
3
1
4
2
* Click molecule labels to explore molecular sequence information.

Citing MMDB
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