2VOT: Structural and biochemical evidence for a boat-like transition state in beta-mannosidases

PDB ID: 2VOTDownload
MMDB ID: 239973
PDB Deposition Date: 2008/2/20
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.95  Å
Source Organism:
Similar Structures:
Biological Unit for 2VOT: monomeric; determined by author and by software (PQS)
Molecular Components in 2VOT
Label Count Molecule
Protein (1 molecule)
1
Beta-mannosidase
Molecule annotation
Chemicals and Non-standard biopolymers (31 molecules)
1
1
(5R,6R,7S,8R)-6,7,8-trihydroxy-5-(hydroxymethyl)-2-[(phenylamino)methyl]-5,6,7,8-tetrahydro-1H-imidazo[1,2-a]pyridin-4-ium(5R,6R,7S,8R)-6,7,8-trihydroxy-5-(hydroxymethyl)-2-[(phenylamino)methyl]-5,6,7,8-tetrahydro-1H-imidazo[1,2-a]pyridin-4-ium
2
25
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
5
BROMIDE IONBROMIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303