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Biotechnology Information

2UUB: Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin

PDB ID:

MMDB ID:

152764

PDB Deposition Date:

2007/3/1

Updated in MMDB:

2023/12

Experimental Method:

x-ray diffraction

Resolution:

2.8 Å

Source Organism:

Thermus thermophilus HB8▼

Taxonomy	Molecule
Thermus thermophilus HB8	A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U
synthetic construct	X, Y

Similar Structures:

Biological Unit for 2UUB: 23-meric; determined by author and by software (PQS)

Molecular Components in 2UUB
Label	Count	Molecule
Proteins (20 molecules)
B	1	30S Ribosomal Protein S2
C	1	30S Ribosomal Protein S3
D	1	30S Ribosomal Protein S4
E	1	30S Ribosomal Protein S5
F	1	30S Ribosomal Protein S6
G	1	30S Ribosomal Protein S7
H	1	30S Ribosomal Protein S8
I	1	30S Ribosomal Protein S9
J	1	30S Ribosomal Protein S10
K	1	30S Ribosomal Protein S11
L	1	30S Ribosomal Protein S12
M	1	30S Ribosomal Protein S13
N	1	30S Ribosomal Protein S14
O	1	30S Ribosomal Protein S15
P	1	30S Ribosomal Protein S16
Q	1	30S Ribosomal Protein S17
R	1	30S Ribosomal Protein S18
S	1	30S Ribosomal Protein S19
T	1	30S Ribosomal Protein S20
U	1	30S Ribosomal Protein THX
Nucleotides(3 molecules)
A	1	16S Ribosomal RNA
X	1	5'-r(gpupupapapap)-3'
Y	1	5'-r(cpcpupcpcpcpupcm0papcp6mzpap gpgpapgp*g)-3'
Chemicals and Non-standard biopolymers (256 molecules)
1	1	PAROMOMYCIN
2	218	MAGNESIUM ION
3	35	POTASSIUM ION
4	2	ZINC ION

* Click molecule labels to explore molecular sequence information.

Citing MMDB