2MK0: Structure of the PSCD4-domain of the cell wall protein pleuralin-1 from the diatom Cylindrotheca fusiformis

Diatoms are eukaryotic unicellular algae characterized by silica cell walls and associated with three unique protein families, the pleuralins, frustulins, and silaffins. The NMR structure of the PSCD4 domain of pleuralin-1 from Cylindrotheca fusiformis contains only three short helical elements and is stabilized by five unique disulfide bridges. PSCD4 contains two binding sites for Ca(2+) ions with millimolar affinity. NMR-based interaction studies show an interaction of the domain with native silaffin-1A as well as with alpha-frustulins. The interaction sites of the two proteins mapped on the PSCD4 structure are contiguous and show only a small overlap. A plausible functional role of pleuralin could be to bind simultaneously silaffin-1A located inside the cell wall and alpha-frustulin coating the cell wall, thus connecting the interfaces between hypotheca and epitheca at the girdle bands. Restrained molecular dynamics calculations suggest a bead-chain-like structure of the central part of pleuralin-1.
PDB ID: 2MK0Download
MMDB ID: 127223
PDB Deposition Date: 2014/1/22
Updated in MMDB: 2016/12
Experimental Method:
solution nmr
Source Organism:
Similar Structures:
Biological Unit for 2MK0: monomeric; determined by author
Molecular Components in 2MK0
Label Count Molecule
Protein (1 molecule)
Hep200 Protein
Molecule annotation
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Citing MMDB