2FIK: Structure of a microbial glycosphingolipid bound to mouse CD1d

PDB ID: 2FIKDownload
MMDB ID: 38268
PDB Deposition Date: 2005/12/29
Updated in MMDB: 2012/10
Experimental Method:
x-ray diffraction
Resolution: 1.8  Å
Source Organism:
Similar Structures:
Biological Unit for 2FIK: dimeric; determined by author and by software (PISA)
Molecular Components in 2FIK
Label Count Molecule
Proteins (2 molecules)
1
T-cell Surface Glycoprotein Cd1d1
(Gene symbol: Cd1d1)
Molecule annotation
1
B(2)-microglobulin
(Gene symbol: B2m)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
4
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
(2S,3R)-3-HYDROXY-2-(TETRADECANOYLAMINO)OCTADECYL ALPHA-D-GALACTOPYRANOSIDURONIC ACID(2S,3R)-3-HYDROXY-2-(TETRADECANOYLAMINO)OCTADECYL ALPHA-D-GALACTOPYRANOSIDURONIC ACID
3
1
PALMITIC ACIDPALMITIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303