2D7R: Crystal structure of pp-GalNAc-T10 complexed with GalNAc-Ser on lectin domain

PDB ID: 2D7RDownload
MMDB ID: 42616
PDB Deposition Date: 2005/11/25
Updated in MMDB: 2006/12
Experimental Method:
x-ray diffraction
Resolution: 2.8  Å
Source Organism:
Similar Structures:
Biological Unit for 2D7R: monomeric; determined by author and by software (PISA)
Molecular Components in 2D7R
Label Count Molecule
Protein (1 molecule)
1
Polypeptide N-acetylgalactosaminyltransferase 10
(Gene symbol: GALNT10)
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
4
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
2-acetamido-2-deoxy-beta-D-galactopyranose2-acetamido-2-deoxy-beta-D-galactopyranose
3
1
MANGANESE (II) IONMANGANESE (II) ION
4
1
URIDINE-5'-DIPHOSPHATEURIDINE-5'-DIPHOSPHATE
5
1
SERINESERINE
6
1
2-acetamido-2-deoxy-alpha-D-galactopyranose2-acetamido-2-deoxy-alpha-D-galactopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303