2CDO: structure of agarase carbohydrate binding module in complex with neoagarohexaose

PDB ID: 2CDODownload
MMDB ID: 86942
PDB Deposition Date: 2006/1/25
Updated in MMDB: 2010/12
Experimental Method:
x-ray diffraction
Resolution: 1.64  Å
Source Organism:
Similar Structures:
Biological Unit for 2CDO: monomeric; determined by author and by software (PQS)
Molecular Components in 2CDO
Label Count Molecule
Protein (1 molecule)
1
Beta-agarase 1
Molecule annotation
Chemicals and Non-standard biopolymers (19 molecules)
1
4
beta-D-galactopyranosebeta-D-galactopyranose
2
4
3,6-anhydro-alpha-L-galactopyranose3,6-anhydro-alpha-L-galactopyranose
3
2
CALCIUM IONCALCIUM ION
4
5
CHLORIDE IONCHLORIDE ION
5
4
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303