1YPL: X-ray crystal structure of thrombin inhibited by synthetic cyanopeptide analogue RA-1008

PDB ID: 1YPLDownload
MMDB ID: 36982
PDB Deposition Date: 2005/1/31
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 1.85  Å
Source Organism:
Homo sapiens▼
Similar Structures:
Biological Unit for 1YPL: trimeric; determined by author
Molecular Components in 1YPL
Label Count Molecule
Proteins (3 molecules)
1
Thrombin Light Chain
Molecule annotation
1
Thrombin Heavy Chain
Molecule annotation
1
Hirudin
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
2
SODIUM IONSODIUM ION
2
1
N-(BENZYLSULFONYL)-L-LEUCYL-N-(4-{[AMINO(IMINO)METHYL]AMINO}BUTYL)-L-PROLINAMIDEN-(BENZYLSULFONYL)-L-LEUCYL-N-(4-{[AMINO(IMINO)METHYL]AMINO}BUTYL)-L-PROLINAMIDE
3
2
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303