1YOE: Crystal structure of a the E. coli pyrimidine nucleoside hydrolase YbeK with bound ribose

PDB ID: 1YOEDownload
MMDB ID: 36971
PDB Deposition Date: 2005/1/27
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.78  Å
Source Organism:
Similar Structures:
Biological Unit for 1YOE: tetrameric; determined by author
Molecular Components in 1YOE
Label Count Molecule
Proteins (4 molecules)
4
Hypothetical Protein Ybek
(Gene symbol: rihA)
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
4
alpha-D-ribofuranosealpha-D-ribofuranose
2
4
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303