1YF6: Structure of a quintuple mutant of photosynthetic reaction center from rhodobacter sphaeroides

PDB ID: 1YF6Download
MMDB ID: 33349
PDB Deposition Date: 2004/12/30
Updated in MMDB: 2021/10
Experimental Method:
x-ray diffraction
Resolution: 2.25  Å
Source Organism:
Similar Structures:
Biological Unit for 1YF6: trimeric; determined by author and by software (PISA)
Molecular Components in 1YF6
Label Count Molecule
Proteins (3 molecules)
1
Reaction Center Protein L Chain
Molecule annotation
1
Reaction Center Protein M Chain
Molecule annotation
1
Reaction Center Protein H Chain
Molecule annotation
Chemicals and Non-standard biopolymers (20 molecules)
1
5
BACTERIOCHLOROPHYLL ABACTERIOCHLOROPHYLL A
2
1
BACTERIOPHEOPHYTIN ABACTERIOPHEOPHYTIN A
3
3
UBIQUINONE-10UBIQUINONE-10
4
1
HEPTANE-1,2,3-TRIOLHEPTANE-1,2,3-TRIOL
5
3
LAURYL DIMETHYLAMINE-N-OXIDELAURYL DIMETHYLAMINE-N-OXIDE
6
1
GLYCEROLGLYCEROL
7
1
FE (II) IONFE (II) ION
8
1
CHLORIDE IONCHLORIDE ION
9
2
PHOSPHATE IONPHOSPHATE ION
10
1
SPHEROIDENESPHEROIDENE
11
1
CARDIOLIPINCARDIOLIPIN
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303