1YCL: Crystal Structure of B. subtilis LuxS in Complex with a Catalytic 2-Ketone Intermediate

PDB ID: 1YCLDownload
MMDB ID: 32501
PDB Deposition Date: 2004/12/22
Updated in MMDB: 2021/10
Experimental Method:
x-ray diffraction
Resolution: 1.8  Å
Source Organism:
Similar Structures:
Biological Unit for 1YCL: dimeric; determined by author and by software (PISA,PQS)
Molecular Components in 1YCL
Label Count Molecule
Proteins (2 molecules)
2
S-ribosylhomocysteinase
(Gene symbol: luxS)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
COBALT (II) IONCOBALT (II) ION
2
2
SULFATE IONSULFATE ION
3
2
(S)-2-AMINO-4-[(2S,3R)-2,3,5-TRIHYDROXY-4-OXO-PENTYL]MERCAPTO-BUTYRIC ACID(S)-2-AMINO-4-[(2S,3R)-2,3,5-TRIHYDROXY-4-OXO-PENTYL]MERCAPTO-BUTYRIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303