1SR5: ANTITHROMBIN-ANHYDROTHROMBIN-HEPARIN TERNARY COMPLEX STRUCTURE

PDB ID: 1SR5Download
MMDB ID: 28969
PDB Deposition Date: 2004/3/22
Updated in MMDB: 2004/12
Experimental Method:
x-ray diffraction
Resolution: 3.1  Å
Source Organism:
Similar Structures:
Biological Unit for 1SR5: trimeric; determined by author and by software (PISA)
Molecular Components in 1SR5
Label Count Molecule
Proteins (3 molecules)
1
Antithrombin-iii
(Gene symbol: SERPINC1)
Molecule annotation
1
Prothrombin
(Gene symbol: F2)
Molecule annotation
1
Prothrombin
(Gene symbol: F2)
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
1
1,5-anhydro-3-O-methyl-2,6-di-O-sulfo-D-glucitol1,5-anhydro-3-O-methyl-2,6-di-O-sulfo-D-glucitol
2
1
(2R,3R,4S,5S,6R)-6-(dihydroxymethyl)-3,4-dimethoxytetrahydro-2H-pyran-2,5-diol(2R,3R,4S,5S,6R)-6-(dihydroxymethyl)-3,4-dimethoxytetrahydro-2H-pyran-2,5-diol
3
1
2,3,6-tri-O-sulfo-alpha-D-glucopyranose2,3,6-tri-O-sulfo-alpha-D-glucopyranose
4
1
(2R,3R,4S,5S,6S)-6-(dihydroxymethyl)-3,4-dimethoxytetrahydro-2H-pyran-2,5-diol(2R,3R,4S,5S,6S)-6-(dihydroxymethyl)-3,4-dimethoxytetrahydro-2H-pyran-2,5-diol
5
1
2,3-di-O-methyl-6-O-sulfo-alpha-D-glucopyranose2,3-di-O-methyl-6-O-sulfo-alpha-D-glucopyranose
6
1
2,3,6-tri-O-methyl-beta-D-glucopyranose2,3,6-tri-O-methyl-beta-D-glucopyranose
7
1
4-deoxy-2,3,6-tri-O-methyl-alpha-D-xylo-hexopyranose4-deoxy-2,3,6-tri-O-methyl-alpha-D-xylo-hexopyranose
8
3
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
9
1
2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303