1RD3: 2.5A Structure of Anticoagulant Thrombin Variant E217K

PDB ID: 1RD3Download
MMDB ID: 27310
PDB Deposition Date: 2003/11/5
Updated in MMDB: 2021/11
Experimental Method:
x-ray diffraction
Resolution: 2.5  Å
Source Organism:
Similar Structures:
Biological Unit for 1RD3: tetrameric; determined by author
Molecular Components in 1RD3
Label Count Molecule
Proteins (4 molecules)
2
Prothrombin
(Gene symbol: F2)
Molecule annotation
2
Prothrombin
(Gene symbol: F2)
Molecule annotation
Chemicals and Non-standard biopolymers (17 molecules)
1
2
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
2-acetamido-2-deoxy-alpha-D-glucopyranose2-acetamido-2-deoxy-alpha-D-glucopyranose
3
1
beta-D-mannopyranosebeta-D-mannopyranose
4
1
alpha-D-mannopyranosealpha-D-mannopyranose
5
2
alpha-L-fucopyranosealpha-L-fucopyranose
6
3
PHOSPHATE IONPHOSPHATE ION
7
6
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303