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1ORP:
Structure of a Trapped Endonuclease III-DNA Covalent Intermediate: Estranged-Adenine Complex
PDB ID:
1ORP
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MMDB ID:
70615
PDB Deposition Date:
2003/3/14
Updated in MMDB:
2023/08
Experimental Method:
x-ray diffraction
Resolution:
2.2 Å
Source Organism:
synthetic construct
▼
Taxonomy
Molecule
synthetic construct
B, C
Geobacillus stearothermophilus
A
Similar Structures:
VAST+
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Biological Unit for 1ORP: trimeric; determined by author
Molecular Components in 1ORP
Label
Count
Molecule
Protein (1 molecule)
A
1
Endonuclease III
Nucleotides(2 molecules)
B
1
5'-d(*ap*ap*gp*ap*cp*ap*tp*gp*gp*ap*c)-3'
C
1
5'-d(*gp*tp*cp*cp*ap*(ped)p*gp*tp*cp*t)-3'
Chemicals and Non-standard biopolymers (3 molecules)
1
1
SODIUM ION
2
1
IRON/SULFUR CLUSTER
3
1
Molecule information is not available.
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303