1OFL: CRYSTAL STRUCTURE OF CHONDROITINASE B COMPLEXED TO DERMATAN SULFATE HEXASACCHARIDE

PDB ID: 1OFLDownload
MMDB ID: 28124
PDB Deposition Date: 2003/4/15
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.7  Å
Source Organism:
Similar Structures:
Biological Unit for 1OFL: monomeric; determined by author and by software (PQS)
Molecular Components in 1OFL
Label Count Molecule
Protein (1 molecule)
1
Chondroitinase B
Molecule annotation
Chemicals and Non-standard biopolymers (16 molecules)
1
1
alpha-D-mannopyranosealpha-D-mannopyranose
2
1
alpha-D-glucopyranuronic acidalpha-D-glucopyranuronic acid
3
1
beta-D-xylopyranosebeta-D-xylopyranose
4
1
2-O-methyl-alpha-L-fucopyranose2-O-methyl-alpha-L-fucopyranose
5
1
alpha-D-galactopyranosealpha-D-galactopyranose
6
1
beta-D-glucopyranosebeta-D-glucopyranose
7
1
alpha-L-rhamnopyranosealpha-L-rhamnopyranose
8
3
2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose
9
4
4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid
10
1
2-acetamido-2-deoxy-4-O-sulfo-alpha-D-galactopyranose2-acetamido-2-deoxy-4-O-sulfo-alpha-D-galactopyranose
11
1
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303