1K3X: Crystal structure of a trapped reaction intermediate of the DNA repair enzyme Endonuclease VIII with Brominated-DNA

PDB ID: 1K3XDownload
MMDB ID: 234394
PDB Deposition Date: 2001/10/4
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 1.25  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 1K3X: trimeric; determined by author
Molecular Components in 1K3X
Label Count Molecule
Protein (1 molecule)
1
Endonuclease Viii
Molecule annotation
Nucleotides(2 molecules)
1
5'-d(*gp*gp*cp*(bru)p*(bru)p*cp*ap*(bru)p*cp*cp*(bru)p*gp*g)-3'
Molecule annotation
1
5'-d(*cp*cp*ap*gp*gp*ap*(ped)p*gp*ap*ap*gp*cp*c)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
1
ZINC IONZINC ION
2
5
SULFATE IONSULFATE ION
3
4
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303