1JX4: Crystal Structure of a Y-family DNA Polymerase in a Ternary Complex with DNA Substrates and an Incoming Nucleotide

PDB ID: 1JX4Download
MMDB ID: 95140
PDB Deposition Date: 2001/9/5
Updated in MMDB: 2011/11
Experimental Method:
x-ray diffraction
Resolution: 1.7  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 1JX4: trimeric; determined by author
Molecular Components in 1JX4
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase IV (Family Y)
Molecule annotation
Nucleotides(2 molecules)
1
5'-d(*gp*gp*gp*gp*gp*ap*ap*gp*gp*ap*cp*tp*a)-3'
Molecule annotation
1
5'-d(*t*tp*cp*ap*tp*tp*ap*gp*tp*cp*cp*tp*tp*cp*cp*cp*cp*c)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
CALCIUM IONCALCIUM ION
2
1
MAGNESIUM IONMAGNESIUM ION
3
1
2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303