6GKM: CryoEM structure of the MDA5-dsRNA filament in complex with ATP (10 mM)

PDB ID: 6GKMDownload
MMDB ID: 168952
PDB Deposition Date: 2018/5/21
Updated in MMDB: 2018/11
Experimental Method:
electron microscopy
Resolution: 3.87  Å
Source Organism:
Cystovirus phi6▼
Similar Structures:
Biological Unit for 6GKM: trimeric; determined by author and by software (PISA)
Molecular Components in 6GKM
Label Count Molecule
Protein (1 molecule)
1
Interferon-induced Helicase C Domain-containing Protein 1
Molecule annotation
Nucleotides(2 molecules)
1
RNA (5'-r(p*cp*ap*ap*gp*cp*cp*gp*ap*gp*gp*ap*gp*ap*g)-3')
Molecule annotation
1
RNA (5'-r(p*cp*up*cp*up*cp*cp*up*cp*gp*gp*cp*up*up*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
ZINC IONZINC ION
2
1
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303