5KNB: Crystal structure of the 2 ADP-bound V1 complex

PDB ID: 5KNBDownload
MMDB ID: 144561
PDB Deposition Date: 2016/6/28
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 3.251  Å
Source Organism:
Similar Structures:
Biological Unit for 5KNB: octameric; determined by author and by software (PISA)
Molecular Components in 5KNB
Label Count Molecule
Proteins (8 molecules)
3
V-type Sodium Atpase Catalytic Subunit a
Molecule annotation
3
V-type Sodium Atpase Subunit B
(Gene symbol: EHR_RS07790)
Molecule annotation
1
V-type Sodium Atpase Subunit D
Molecule annotation
1
V-type Sodium Atpase Subunit Ntpg (F)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
MAGNESIUM IONMAGNESIUM ION
2
2
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
3
2
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303