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Conserved domains on  [gi|85080302|ref|XP_956517|]
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ATP synthase subunit 5 [Neurospora crassa OR74A]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 40-216 4.11e-53

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


:

Pssm-ID: 459714  Cd Length: 172  Bit Score: 168.47  E-value: 4.11e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302    40 LDGTYATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIVAELQKsvGVSNETVKNFLATLAE 119
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAENPDLAAFLSNPTISAEEKKALLLELFK--GLLSPLTLNFLKLLAE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   120 NNRLGLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKspyVGSGKKLKVTNKVNADIIGGLVVEIGER 199
Cdd:pfam00213  79 NGRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEK---KTGKKKVKLENKVDPSLIGGVVVRVGDK 155

                         170
                  ....*....|....*..
gi 85080302   200 TIDLSVSSKIAKMNKLL 216
Cdd:pfam00213 156 VIDGSVKGKLERLKRAL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 40-216 4.11e-53

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 168.47  E-value: 4.11e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302    40 LDGTYATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIVAELQKsvGVSNETVKNFLATLAE 119
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAENPDLAAFLSNPTISAEEKKALLLELFK--GLLSPLTLNFLKLLAE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   120 NNRLGLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKspyVGSGKKLKVTNKVNADIIGGLVVEIGER 199
Cdd:pfam00213  79 NGRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEK---KTGKKKVKLENKVDPSLIGGVVVRVGDK 155

                         170
                  ....*....|....*..
gi 85080302   200 TIDLSVSSKIAKMNKLL 216
Cdd:pfam00213 156 VIDGSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 44-218 1.19e-43

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 144.53  E-value: 1.19e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302  44 YATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIVAELQKsvGVSNETVKNFLATLAENNRL 123
Cdd:COG0712  10 YAKALFELAKEKGALDEVEEELFALAALLAENPELRALLSSPVISAEEKKELLEALFG--GKLSPETLNFLKLLVENGRL 87

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302 124 GLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKSpyvgSGKKLKVTNKVNADIIGGLVVEIGERTIDL 203
Cdd:COG0712  88 ALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKK----TGKKVELNVKVDPSLIGGVVVRVGDKVIDG 163

                       170
                ....*....|....*
gi 85080302 204 SVSSKIAKMNKLLSE 218
Cdd:COG0712 164 SVRGRLNRLRRALKG 178
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 44-216 3.09e-40

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 135.68  E-value: 3.09e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   44 YATALYTAAVKTSALEPTAKAISSLgNLLAKDPKLASILETPTLSPADKSAIVAELQKSVgvsNETVKNFLATLAENNRL 123
Cdd:PRK05758  11 YAKALFEVALEKGSLDAWSEELTFL-AEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSL---SEYVQNFLKVLAENGRL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302  124 GLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKSpyvgSGKKLKVTNKVNADIIGGLVVEIGERTIDL 203
Cdd:PRK05758  87 ALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKR----LGRKVKLNEKVDPSLIGGVIIKVGDRVIDG 162

                        170
                 ....*....|...
gi 85080302  204 SVSSKIAKMNKLL 216
Cdd:PRK05758 163 SVRGKLERLKDAL 175
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 44-216 7.50e-25

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 95.84  E-value: 7.50e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302    44 YATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIVaelQKSVGVS-NETVKNFLATLAENNR 122
Cdd:TIGR01145   5 YAKALFEIANEKSSLEEWGEMLNFVKEVLKNNKELKKFLSNPLISAEKKKEFI---KNVFGEQlDESSLNLLLLLAENGR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   123 LGLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKspyVGSGKKLKVTNKVNADIIGGLVVEIGERTID 202
Cdd:TIGR01145  82 LAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEK---ITGAAKVKLNCKVDKDLIGGVIIRIGDRVID 158

                         170
                  ....*....|....
gi 85080302   203 LSVSSKIAKMNKLL 216
Cdd:TIGR01145 159 GSVRGQLKRLSRQL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 40-216 4.11e-53

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 168.47  E-value: 4.11e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302    40 LDGTYATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIVAELQKsvGVSNETVKNFLATLAE 119
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAENPDLAAFLSNPTISAEEKKALLLELFK--GLLSPLTLNFLKLLAE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   120 NNRLGLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKspyVGSGKKLKVTNKVNADIIGGLVVEIGER 199
Cdd:pfam00213  79 NGRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEK---KTGKKKVKLENKVDPSLIGGVVVRVGDK 155

                         170
                  ....*....|....*..
gi 85080302   200 TIDLSVSSKIAKMNKLL 216
Cdd:pfam00213 156 VIDGSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 44-218 1.19e-43

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 144.53  E-value: 1.19e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302  44 YATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIVAELQKsvGVSNETVKNFLATLAENNRL 123
Cdd:COG0712  10 YAKALFELAKEKGALDEVEEELFALAALLAENPELRALLSSPVISAEEKKELLEALFG--GKLSPETLNFLKLLVENGRL 87

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302 124 GLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKSpyvgSGKKLKVTNKVNADIIGGLVVEIGERTIDL 203
Cdd:COG0712  88 ALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKK----TGKKVELNVKVDPSLIGGVVVRVGDKVIDG 163

                       170
                ....*....|....*
gi 85080302 204 SVSSKIAKMNKLLSE 218
Cdd:COG0712 164 SVRGRLNRLRRALKG 178
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 44-216 3.09e-40

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 135.68  E-value: 3.09e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   44 YATALYTAAVKTSALEPTAKAISSLgNLLAKDPKLASILETPTLSPADKSAIVAELQKSVgvsNETVKNFLATLAENNRL 123
Cdd:PRK05758  11 YAKALFEVALEKGSLDAWSEELTFL-AEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSL---SEYVQNFLKVLAENGRL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302  124 GLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKSpyvgSGKKLKVTNKVNADIIGGLVVEIGERTIDL 203
Cdd:PRK05758  87 ALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKR----LGRKVKLNEKVDPSLIGGVIIKVGDRVIDG 162

                        170
                 ....*....|...
gi 85080302  204 SVSSKIAKMNKLL 216
Cdd:PRK05758 163 SVRGKLERLKDAL 175
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 44-212 1.18e-35

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 124.16  E-value: 1.18e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   44 YATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIVAELQKSVGVSnETVKNFLATLAENNRL 123
Cdd:PRK13429  10 YAKALFQLAKEKGQLDSVYEELKQLAELLEDSPELRDALSNPVLSAEEKKAVLEKLLGKLKVS-PEVLNFLKLLADRRRL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302  124 GLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKSpyvgSGKKLKVTNKVNADIIGGLVVEIGERTIDL 203
Cdd:PRK13429  89 GILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEKM----TGKKVELDTAVDPSLIGGVVVKIGDKVLDA 164


                 ....*....
gi 85080302  204 SVSSKIAKM 212
Cdd:PRK13429 165 SVRTQLRRL 173
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 44-216 7.50e-25

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 95.84  E-value: 7.50e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302    44 YATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIVaelQKSVGVS-NETVKNFLATLAENNR 122
Cdd:TIGR01145   5 YAKALFEIANEKSSLEEWGEMLNFVKEVLKNNKELKKFLSNPLISAEKKKEFI---KNVFGEQlDESSLNLLLLLAENGR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   123 LGLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKspyVGSGKKLKVTNKVNADIIGGLVVEIGERTID 202
Cdd:TIGR01145  82 LAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEK---ITGAAKVKLNCKVDKDLIGGVIIRIGDRVID 158

                         170
                  ....*....|....
gi 85080302   203 LSVSSKIAKMNKLL 216
Cdd:TIGR01145 159 GSVRGQLKRLSRQL 172
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 44-216 2.37e-15

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 71.17  E-value: 2.37e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   44 YATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIVAELQKSVgVSNETVKnFLATLAENNRL 123
Cdd:CHL00119  12 YAEALLEFAKEKNIMEQITADIQLILTFLNESPELKKFLANPLISKNAKKEVIKKTFGSQ-INENTLK-FLMVLVDRGRI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302  124 GLLPSVVAKFSELMSAARGeVEMV-VTSAQPLDNKTLNRLesaVAKSPYVGSGKKLKVTNKVNADIIGGLVVEIGERTID 202
Cdd:CHL00119  90 ALLDAIIEKYLELVYKLAS-IKIAeVSTAVPLSSAQEEAL---IEKLKEMTNAKEIKLVITVDPSLIGGFLIKIGSKVID 165

                        170
                 ....*....|....
gi 85080302  203 LSVSSKIAKMNKLL 216
Cdd:CHL00119 166 TSIKGQLKQLASHL 179
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 43-218 1.39e-13

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 66.16  E-value: 1.39e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   43 TYATALyTAAVKTSALEPTAKAISSLgNLLAKDPKLASILETPTLSPADKSAIVAELqksVGVSNETVKNFLATLAENNR 122
Cdd:PRK08474   8 RYAKAL-LSSLSSDELNDIYSNLKIL-SSAFADEKFKEIISSPEISKEQKIEFLLSF---VDNANAKFQNFIKLLAENKR 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302  123 LGLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKspYVGSgkKLKVTNKVNAdiIGGLVVEIGERTID 202
Cdd:PRK08474  83 LELIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKLEEKLSK--KFNA--KIKLKQKKSD--YDGIKVEVDDLGVE 156

                        170
                 ....*....|....*.
gi 85080302  203 LSVSskIAKMNKLLSE 218
Cdd:PRK08474 157 VSFS--KDRLKNQLIE 170
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 39-218 2.04e-13

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 66.11  E-value: 2.04e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   39 GLDGTYATALYTAAvktSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIvaeLQKSV-GVSNETVKNFLATL 117
Cdd:PRK13434   5 GVSKVYASALLGAA---NSPEEVEQELGDLVQLLFKDEKIRNFFLSPTVSPEEKEQT---LAKNLrGKISDITLNFLGVL 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302  118 AENNRLGLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKSpyvgSGKKLKVTNKVNADIIGGLVVEIG 197
Cdd:PRK13434  79 LNKGRFIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSEK----FKSEFILEVSEDKNLLGGFVVQFN 154

                        170       180
                 ....*....|....*....|.
gi 85080302  198 ERTIDLSVSSKIAKMNKLLSE 218
Cdd:PRK13434 155 DLKIEKSIASQLGEIKKAMLE 175
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 46-212 9.89e-12

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 62.66  E-value: 9.89e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   46 TALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIVAELQkSVGVSNETVKnfLAT-LAENNRLG 124
Cdd:PRK13430 105 RALLASAEAQGALDDVEDELFRLGRILASNPELRLALSDRAAPAEAKRELLARLL-YGKVTPVTER--LAEqAVGRPRGR 181

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302  125 LLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKSpyvgSGKKLKVTNKVNADIIGGLVVEIGERTIDLS 204
Cdd:PRK13430 182 SIEEGLDELSNLAAARRGRSVATVTTAVPLSDEQKQRLAAALSRI----YGRPVHLNSEVDPSVLGGMRVQVGDEVIDGS 257


                 ....*...
gi 85080302  205 VSSKIAKM 212
Cdd:PRK13430 258 VAGRLERL 265
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 39-211 5.26e-11

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 61.29  E-value: 5.26e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   39 GLDGTYATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLsPADKSaiVAELQK---SVGVSNETVKNFLA 115
Cdd:PRK13428 270 ALEHVARLALLERAERAGQVDEVEDQLFRFSRILDAQPRLAILLSDYTV-PADGR--VALLRKvlgGASTVNPVTVALLS 346

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302  116 TLAENNRLGLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKSpyvgSGKKLKVTNKVNADIIGGLVVE 195
Cdd:PRK13428 347 QTVELLRGQPAEEAVLFLAELAVARRGEVVAQVSAAAELSDAQRTRLTEVLSRI----YGRPVSVQLHIDPELLGGLSIA 422

                        170
                 ....*....|....*.
gi 85080302  196 IGERTIDLSVSSKIAK 211
Cdd:PRK13428 423 VGDEVIDGTLSSRLAA 438
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 42-220 2.01e-10

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 57.84  E-value: 2.01e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   42 GTYATALYTAAVKTSALEPTAKAISSLGNLLAKdpkLASILETPTLSPADKSAIVAELQKSVGVS-NETVKNFLATLAEN 120
Cdd:PRK13441   8 SKYARALLNVAIELEKEEEYGEFLDLVCQIYES---AKEFFDNPIVKPEKKVSLIKEIMKEFGQEmDEFFENFLNLVFEN 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302  121 NRLGLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKspYVGSGKKLKVTnkVNADIIGGLVVEIGERT 200
Cdd:PRK13441  85 KRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRK--YVLRDPVFEET--IDESLIAGAVVEFEGKR 160

                        170       180
                 ....*....|....*....|
gi 85080302  201 IDLSVSskiAKMNKLLSEAL 220
Cdd:PRK13441 161 LDVTVQ---GRLKKIAREVL 177
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 44-214 3.26e-09

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 54.29  E-value: 3.26e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302   44 YATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIVAELQKSVgvSNETVKNFLATLAENNRL 123
Cdd:PRK13436  11 YAEALFDIANEENNVEKYINEVFKIIEILKNNKDLIKLLTSYFIDKEEKFKIIDKIFSAK--IDIYLVNFLKILAKNNLF 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 85080302  124 GLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKSpyvgSGKKLKVTNKVNADIIGGLVVEIGERTIDL 203
Cdd:PRK13436  89 IYIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSKK----LNKKVHLVNKIDPKLIAGIKIKVDNKVFEN 164

                        170
                 ....*....|.
gi 85080302  204 SVSSKIAKMNK 214
Cdd:PRK13436 165 SIKSKLKELKK 175
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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