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Conserved domains on  [gi|1034611816|ref|XP_016858899|]
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otospiralin isoform X2 [Homo sapiens]

Protein Classification

OTOS domain-containing protein( domain architecture ID 10633539)

OTOS domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
OTOS pfam15182
Otospiralin; This family of proteins, Otospiralin, has a role in maintaining the neurosensory ...
 21-89 5.70e-44

Otospiralin; This family of proteins, Otospiralin, has a role in maintaining the neurosensory epithelium of the inner ear. This family of proteins is found in eukaryotes. Proteins in this family are approximately 90 amino acids in length.


:

Pssm-ID: 464549  Cd Length: 69  Bit Score: 136.51  E-value: 5.70e-44
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034611816 21 AKPVQEEGDPYAELPAMPYWPFSTSDFWNYVQHFQALGAYPQIEDMARTFFAHFPLGSTLGFHVPYQED 89
Cdd:pfam15182  1 ARPVQEEGDPYAEPPAMPYWPFSTSDFWNYVEYFRSLGAYNQINDMARTFFAHYPLGDTLGYNVPYQEE 69
 
Name Accession Description Interval E-value
OTOS pfam15182
Otospiralin; This family of proteins, Otospiralin, has a role in maintaining the neurosensory ...
 21-89 5.70e-44

Otospiralin; This family of proteins, Otospiralin, has a role in maintaining the neurosensory epithelium of the inner ear. This family of proteins is found in eukaryotes. Proteins in this family are approximately 90 amino acids in length.


Pssm-ID: 464549  Cd Length: 69  Bit Score: 136.51  E-value: 5.70e-44
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034611816 21 AKPVQEEGDPYAELPAMPYWPFSTSDFWNYVQHFQALGAYPQIEDMARTFFAHFPLGSTLGFHVPYQED 89
Cdd:pfam15182  1 ARPVQEEGDPYAEPPAMPYWPFSTSDFWNYVEYFRSLGAYNQINDMARTFFAHYPLGDTLGYNVPYQEE 69
 
Name Accession Description Interval E-value
OTOS pfam15182
Otospiralin; This family of proteins, Otospiralin, has a role in maintaining the neurosensory ...
 21-89 5.70e-44

Otospiralin; This family of proteins, Otospiralin, has a role in maintaining the neurosensory epithelium of the inner ear. This family of proteins is found in eukaryotes. Proteins in this family are approximately 90 amino acids in length.


Pssm-ID: 464549  Cd Length: 69  Bit Score: 136.51  E-value: 5.70e-44
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034611816 21 AKPVQEEGDPYAELPAMPYWPFSTSDFWNYVQHFQALGAYPQIEDMARTFFAHFPLGSTLGFHVPYQED 89
Cdd:pfam15182  1 ARPVQEEGDPYAEPPAMPYWPFSTSDFWNYVEYFRSLGAYNQINDMARTFFAHYPLGDTLGYNVPYQEE 69
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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