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Conserved domains on  [gi|530387093|ref|XP_005250096|]
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protein mono-ADP-ribosyltransferase PARP12 isoform X4 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
WWE smart00678
Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated ...
 299-372 2.14e-14

Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis;


:

Pssm-ID: 128922 [Multi-domain]  Cd Length: 73  Bit Score: 67.75  E-value: 2.14e-14
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 530387093   299 YRWQFLDR-GKWEDLD--NMELIEEAYC--NPKIERILCSesastfHSHCLNFNAMTYGATQARRLSTASSVTKPPHFI 372
Cdd:smart00678   1 YVWEYEGRnGKWWPYDprVSEDIEEAYAagKKLCELSICG------FPYTIDFNAMTQYNQATGTTRKVRRVTYSPYSK 73
ZnF_C3H1 smart00356
zinc finger;
177-200 3.87e-03

zinc finger;


:

Pssm-ID: 214632 [Multi-domain]  Cd Length: 27  Bit Score: 34.53  E-value: 3.87e-03
                           10        20
                   ....*....|....*....|....
gi 530387093   177 KLHICQYFLQGECKFGTSCKRSHD 200
Cdd:smart00356   3 KTELCKFFKRGYCPRGDRCKFAHP 26
 
Name Accession Description Interval E-value
WWE smart00678
Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated ...
 299-372 2.14e-14

Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis;


Pssm-ID: 128922 [Multi-domain]  Cd Length: 73  Bit Score: 67.75  E-value: 2.14e-14
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 530387093   299 YRWQFLDR-GKWEDLD--NMELIEEAYC--NPKIERILCSesastfHSHCLNFNAMTYGATQARRLSTASSVTKPPHFI 372
Cdd:smart00678   1 YVWEYEGRnGKWWPYDprVSEDIEEAYAagKKLCELSICG------FPYTIDFNAMTQYNQATGTTRKVRRVTYSPYSK 73
ZnF_C3H1 smart00356
zinc finger;
177-200 3.87e-03

zinc finger;


Pssm-ID: 214632 [Multi-domain]  Cd Length: 27  Bit Score: 34.53  E-value: 3.87e-03
                           10        20
                   ....*....|....*....|....
gi 530387093   177 KLHICQYFLQGECKFGTSCKRSHD 200
Cdd:smart00356   3 KTELCKFFKRGYCPRGDRCKFAHP 26
 
Name Accession Description Interval E-value
WWE smart00678
Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated ...
 299-372 2.14e-14

Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis;


Pssm-ID: 128922 [Multi-domain]  Cd Length: 73  Bit Score: 67.75  E-value: 2.14e-14
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 530387093   299 YRWQFLDR-GKWEDLD--NMELIEEAYC--NPKIERILCSesastfHSHCLNFNAMTYGATQARRLSTASSVTKPPHFI 372
Cdd:smart00678   1 YVWEYEGRnGKWWPYDprVSEDIEEAYAagKKLCELSICG------FPYTIDFNAMTQYNQATGTTRKVRRVTYSPYSK 73
ZnF_C3H1 smart00356
zinc finger;
177-200 3.87e-03

zinc finger;


Pssm-ID: 214632 [Multi-domain]  Cd Length: 27  Bit Score: 34.53  E-value: 3.87e-03
                           10        20
                   ....*....|....*....|....
gi 530387093   177 KLHICQYFLQGECKFGTSCKRSHD 200
Cdd:smart00356   3 KTELCKFFKRGYCPRGDRCKFAHP 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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