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Conserved domains on  [gi|15599665|ref|NP_253159|]
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hypothetical protein PA4469 [Pseudomonas aeruginosa PAO1]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2753 super family cl12528
Protein of unknown function (DUF2753); This bacterial family of proteins has no known function.
 4-83 5.67e-04

Protein of unknown function (DUF2753); This bacterial family of proteins has no known function.


The actual alignment was detected with superfamily member pfam10952:

Pssm-ID: 431555  Cd Length: 140  Bit Score: 37.86  E-value: 5.67e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599665     4 WQRTIEQGNRCFVTGALIDAREHYLHALALAQVLLERW-GDADEAVMAFVISHHNLADLHLQLEQPEETAEYLCACHERL 82
Cdd:pfam10952   1 WERHTLLAENALKAGDPGRSILHYQQALAESQELIEGSeIELDDLLTISVISCHNLADFWRAMGDNAYELKYLQLASEKV 80


                  .
gi 15599665    83 L 83
Cdd:pfam10952  81 L 81
 
Name Accession Description Interval E-value
DUF2753 pfam10952
Protein of unknown function (DUF2753); This bacterial family of proteins has no known function.
 4-83 5.67e-04

Protein of unknown function (DUF2753); This bacterial family of proteins has no known function.


Pssm-ID: 431555  Cd Length: 140  Bit Score: 37.86  E-value: 5.67e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599665     4 WQRTIEQGNRCFVTGALIDAREHYLHALALAQVLLERW-GDADEAVMAFVISHHNLADLHLQLEQPEETAEYLCACHERL 82
Cdd:pfam10952   1 WERHTLLAENALKAGDPGRSILHYQQALAESQELIEGSeIELDDLLTISVISCHNLADFWRAMGDNAYELKYLQLASEKV 80


                  .
gi 15599665    83 L 83
Cdd:pfam10952  81 L 81
 
Name Accession Description Interval E-value
DUF2753 pfam10952
Protein of unknown function (DUF2753); This bacterial family of proteins has no known function.
 4-83 5.67e-04

Protein of unknown function (DUF2753); This bacterial family of proteins has no known function.


Pssm-ID: 431555  Cd Length: 140  Bit Score: 37.86  E-value: 5.67e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15599665     4 WQRTIEQGNRCFVTGALIDAREHYLHALALAQVLLERW-GDADEAVMAFVISHHNLADLHLQLEQPEETAEYLCACHERL 82
Cdd:pfam10952   1 WERHTLLAENALKAGDPGRSILHYQQALAESQELIEGSeIELDDLLTISVISCHNLADFWRAMGDNAYELKYLQLASEKV 80


                  .
gi 15599665    83 L 83
Cdd:pfam10952  81 L 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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