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Conserved domains on  [gi|1879298442|ref|NP_001372611|]
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microtubule-associated protein 4 isoform 6 [Homo sapiens]

Protein Classification

PHA03247 and Tubulin-binding domain-containing protein( domain architecture ID 10450448)

PHA03247 and Tubulin-binding domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 2137-2166 4.98e-13

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


:

Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 64.74  E-value: 4.98e-13
                           10        20        30
                   ....*....|....*....|....*....|
gi 1879298442 2137 VQIVSKKVSYSHIQSKCGSKDNIKHVPGGG 2166
Cdd:pfam00418    1 VKIESKKLDFSKVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 2168-2197 7.95e-13

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


:

Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 63.97  E-value: 7.95e-13
                           10        20        30
                   ....*....|....*....|....*....|
gi 1879298442 2168 VQIQNKKVDISKVSSKCGSKANIKHKPGGG 2197
Cdd:pfam00418    1 VKIESKKLDFSKVQSKCGSKDNIKHKPGGG 30
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 1815-2064 3.57e-11

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 69.20  E-value: 3.57e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1815 RPEEGRPVVSGTGNDITTPPNkelPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVP 1894
Cdd:PHA03247  2684 RRRAARPTVGSLTSLADPPPP---PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP 2760

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1895 AAP--PKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPS 1972
Cdd:PHA03247  2761 PTTagPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPP 2840

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1973 TLLPKKPTAIKTEGKPAE----VKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAA--GVVPSRVKATPMPSRPSTT 2046
Cdd:PHA03247  2841 PPPGPPPPSLPLGGSVAPggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFAlpPDQPERPPQPQAPPPPQPQ 2920

                          250
                   ....*....|....*...
gi 1879298442 2047 PFIDKKPTSAKPSSTTPR 2064
Cdd:PHA03247  2921 PQPPPPPQPQPPPPPPPR 2938
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 2199-2229 1.49e-08

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


:

Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 52.03  E-value: 1.49e-08
                           10        20        30
                   ....*....|....*....|....*....|.
gi 1879298442 2199 VKIESQKLNFKeKAQAKVGSLDNVGHLPAGG 2229
Cdd:pfam00418    1 VKIESKKLDFS-KVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 2076-2097 7.48e-08

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


:

Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 50.10  E-value: 7.48e-08
                           10        20
                   ....*....|....*....|..
gi 1879298442 2076 DLKNVRSKVGSTENIKHQPGGG 2097
Cdd:pfam00418    9 DFSKVQSKCGSKDNIKHKPGGG 30
 
Name Accession Description Interval E-value
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 2137-2166 4.98e-13

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 64.74  E-value: 4.98e-13
                           10        20        30
                   ....*....|....*....|....*....|
gi 1879298442 2137 VQIVSKKVSYSHIQSKCGSKDNIKHVPGGG 2166
Cdd:pfam00418    1 VKIESKKLDFSKVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 2168-2197 7.95e-13

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 63.97  E-value: 7.95e-13
                           10        20        30
                   ....*....|....*....|....*....|
gi 1879298442 2168 VQIQNKKVDISKVSSKCGSKANIKHKPGGG 2197
Cdd:pfam00418    1 VKIESKKLDFSKVQSKCGSKDNIKHKPGGG 30
PHA03247 PHA03247
large tegument protein UL36; Provisional
 1815-2064 3.57e-11

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 69.20  E-value: 3.57e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1815 RPEEGRPVVSGTGNDITTPPNkelPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVP 1894
Cdd:PHA03247  2684 RRRAARPTVGSLTSLADPPPP---PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP 2760

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1895 AAP--PKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPS 1972
Cdd:PHA03247  2761 PTTagPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPP 2840

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1973 TLLPKKPTAIKTEGKPAE----VKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAA--GVVPSRVKATPMPSRPSTT 2046
Cdd:PHA03247  2841 PPPGPPPPSLPLGGSVAPggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFAlpPDQPERPPQPQAPPPPQPQ 2920

                          250
                   ....*....|....*...
gi 1879298442 2047 PFIDKKPTSAKPSSTTPR 2064
Cdd:PHA03247  2921 PQPPPPPQPQPPPPPPPR 2938
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 2199-2229 1.49e-08

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 52.03  E-value: 1.49e-08
                           10        20        30
                   ....*....|....*....|....*....|.
gi 1879298442 2199 VKIESQKLNFKeKAQAKVGSLDNVGHLPAGG 2229
Cdd:pfam00418    1 VKIESKKLDFS-KVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 2076-2097 7.48e-08

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 50.10  E-value: 7.48e-08
                           10        20
                   ....*....|....*....|..
gi 1879298442 2076 DLKNVRSKVGSTENIKHQPGGG 2097
Cdd:pfam00418    9 DFSKVQSKCGSKDNIKHKPGGG 30
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 1799-2131 4.43e-06

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 52.23  E-value: 4.43e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1799 SSTVYQQLGMSVYGIARPEEGRPVVSGTGNDITTPPNKelppSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTI 1878
Cdd:pfam05109  427 STTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPAST----GPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESK 502

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1879 GGLNKKPMSLASGLVPAAPPKRPAVASARPSIL--------PSKDV-KPKPIADAKAPE-------------KRASPSKP 1936
Cdd:pfam05109  503 APDMTSPTSAVTTPTPNATSPTPAVTTPTPNATsptlgktsPTSAVtTPTPNATSPTPAvttptpnatiptlGKTSPTSA 582

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1937 ASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGK----PAEVKKMTAKSVPADLSRPKSTSTS 2012
Cdd:pfam05109  583 VTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQhnitSSSTSSMSLRPSSISETLSPSTSDN 662

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 2013 SMKKTTTLSGTAPAAG-----VVPSRVK------ATPMPsRPSTTPFID---KKPTSAKP------------SSTTPRLS 2066
Cdd:pfam05109  663 STSHMPLLTSAHPTGGenitqVTPASTSthhvstSSPAP-RPGTTSQASgpgNSSTSTKPgevnvtkgtppkNATSPQAP 741

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1879298442 2067 RlATNTSAPDLKNVRSKVGSTENIKHQPG-GGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQK 2131
Cdd:pfam05109  742 S-GQKTAVPTVTSTGGKANSTTGGKHTTGhGARTSTEPTTDYGGDSTTPRTRYNATTYLPPSTSSK 806
 
Name Accession Description Interval E-value
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 2137-2166 4.98e-13

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 64.74  E-value: 4.98e-13
                           10        20        30
                   ....*....|....*....|....*....|
gi 1879298442 2137 VQIVSKKVSYSHIQSKCGSKDNIKHVPGGG 2166
Cdd:pfam00418    1 VKIESKKLDFSKVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 2168-2197 7.95e-13

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 63.97  E-value: 7.95e-13
                           10        20        30
                   ....*....|....*....|....*....|
gi 1879298442 2168 VQIQNKKVDISKVSSKCGSKANIKHKPGGG 2197
Cdd:pfam00418    1 VKIESKKLDFSKVQSKCGSKDNIKHKPGGG 30
PHA03247 PHA03247
large tegument protein UL36; Provisional
 1815-2064 3.57e-11

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 69.20  E-value: 3.57e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1815 RPEEGRPVVSGTGNDITTPPNkelPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVP 1894
Cdd:PHA03247  2684 RRRAARPTVGSLTSLADPPPP---PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP 2760

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1895 AAP--PKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPS 1972
Cdd:PHA03247  2761 PTTagPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPP 2840

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1973 TLLPKKPTAIKTEGKPAE----VKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAA--GVVPSRVKATPMPSRPSTT 2046
Cdd:PHA03247  2841 PPPGPPPPSLPLGGSVAPggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFAlpPDQPERPPQPQAPPPPQPQ 2920

                          250
                   ....*....|....*...
gi 1879298442 2047 PFIDKKPTSAKPSSTTPR 2064
Cdd:PHA03247  2921 PQPPPPPQPQPPPPPPPR 2938
PHA03247 PHA03247
large tegument protein UL36; Provisional
 1813-2071 3.86e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 62.65  E-value: 3.86e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1813 IARPEEGRPVVSGTGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTS----LPKQPAPTTIGGLNKKPmSL 1888
Cdd:PHA03247  2740 APPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESReslpSPWDPADPPAAVLAPAA-AL 2818

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1889 ASGLVPAAP-PKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPS 1967
Cdd:PHA03247  2819 PPAASPAGPlPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESF 2898

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1968 SRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTS----TSSMKKTTTLSGTAPA---AGVVPSRVKAT--- 2037
Cdd:PHA03247  2899 ALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPplapTTDPAGAGEPSGAVPQpwlGALVPGRVAVPrfr 2978

                          250       260       270
                   ....*....|....*....|....*....|....*..
gi 1879298442 2038 ---PMPSRPSTTPfidkkPTSAKPSSTTPRLSRLATN 2071
Cdd:PHA03247  2979 vpqPAPSREAPAS-----STPPLTGHSLSRVSSWASS 3010
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 2199-2229 1.49e-08

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 52.03  E-value: 1.49e-08
                           10        20        30
                   ....*....|....*....|....*....|.
gi 1879298442 2199 VKIESQKLNFKeKAQAKVGSLDNVGHLPAGG 2229
Cdd:pfam00418    1 VKIESKKLDFS-KVQSKCGSKDNIKHKPGGG 30
PHA03247 PHA03247
large tegument protein UL36; Provisional
 1814-2133 4.63e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 59.18  E-value: 4.63e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1814 ARPEEGRPVVSG--TGNDITTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGglnkkpmslasg 1891
Cdd:PHA03247  2591 APPQSARPRAPVddRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAP------------ 2658

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1892 lvPAAPPKRPAVASARPSILPSKDVKPKPIA--DAKAP-EKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSS 1968
Cdd:PHA03247  2659 --GRVSRPRRARRLGRAAQASSPPQRPRRRAarPTVGSlTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALP 2736

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1969 RSPSTllPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTttlsgTAPAAGVVPSRVKATPMPSRPSTTPF 2048
Cdd:PHA03247  2737 AAPAP--PAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRL-----TRPAVASLSESRESLPSPWDPADPPA 2809

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 2049 IDKKPTSAKPSSTTPRlSRLATNTS----APDLKNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAG 2124
Cdd:PHA03247  2810 AVLAPAAALPPAASPA-GPLPPPTSaqptAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLAR 2888


                   ....*....
gi 1879298442 2125 PIASAQKQP 2133
Cdd:PHA03247  2889 PAVSRSTES 2897
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 2076-2097 7.48e-08

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 50.10  E-value: 7.48e-08
                           10        20
                   ....*....|....*....|..
gi 1879298442 2076 DLKNVRSKVGSTENIKHQPGGG 2097
Cdd:pfam00418    9 DFSKVQSKCGSKDNIKHKPGGG 30
PHA03247 PHA03247
large tegument protein UL36; Provisional
 1832-2133 2.61e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 56.49  E-value: 2.61e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1832 TPPnkeLPPSPekktkplattQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAvASARPSIL 1911
Cdd:PHA03247  2552 PPP---LPPAA----------PPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPR-GPAPPSPL 2617

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1912 PSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIktegkPAEV 1991
Cdd:PHA03247  2618 PPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAA-----RPTV 2692

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1992 KKMTAKSVPADLSR-PKSTSTSSMKKTTTLSGTAPAAGVVPSrVKATPMPSRPSTTPFID-------KKPTSAKPSSTTP 2063
Cdd:PHA03247  2693 GSLTSLADPPPPPPtPEPAPHALVSATPLPPGPAAARQASPA-LPAAPAPPAVPAGPATPggparpaRPPTTAGPPAPAP 2771

                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1879298442 2064 RLSRLATNTSAPDLKNVRSKVGSTENI--KHQPGGGRAKVEKKTEAAATTRKPES-----NAVTKTAGPIASAQKQP 2133
Cdd:PHA03247  2772 PAAPAAGPPRRLTRPAVASLSESRESLpsPWDPADPPAAVLAPAAALPPAASPAGplpppTSAQPTAPPPPPGPPPP 2848
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 1821-2088 3.60e-06

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 52.48  E-value: 3.60e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1821 PVVSGTGNDITTPPNKELPPSP---EKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPmslasglVPAAP 1897
Cdd:PHA03307    54 TVVAGAAACDRFEPPTGPPPGPgteAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTP-------PPASP 126

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1898 PkrPAVASARPSILPSKDvKPKPIADAKAPEKRASPSKPASAPASRSGskSTQTVAKTTTAAAVASTGPSSRSPSTLLPK 1977
Cdd:PHA03307   127 P--PSPAPDLSEMLRPVG-SPGPPPAASPPAAGASPAAVASDAASSRQ--AALPLSSPEETARAPSSPPAEPPPSTPPAA 201

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1978 KPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTA-----------PAAGVVPSRVKATPMPSRPSTT 2046
Cdd:PHA03307   202 ASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGwgpenecplprPAPITLPTRIWEASGWNGPSSR 281

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|..
gi 1879298442 2047 PFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGSTE 2088
Cdd:PHA03307   282 PGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRE 323
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 1799-2131 4.43e-06

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 52.23  E-value: 4.43e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1799 SSTVYQQLGMSVYGIARPEEGRPVVSGTGNDITTPPNKelppSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTI 1878
Cdd:pfam05109  427 STTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPAST----GPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESK 502

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1879 GGLNKKPMSLASGLVPAAPPKRPAVASARPSIL--------PSKDV-KPKPIADAKAPE-------------KRASPSKP 1936
Cdd:pfam05109  503 APDMTSPTSAVTTPTPNATSPTPAVTTPTPNATsptlgktsPTSAVtTPTPNATSPTPAvttptpnatiptlGKTSPTSA 582

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1937 ASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGK----PAEVKKMTAKSVPADLSRPKSTSTS 2012
Cdd:pfam05109  583 VTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQhnitSSSTSSMSLRPSSISETLSPSTSDN 662

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 2013 SMKKTTTLSGTAPAAG-----VVPSRVK------ATPMPsRPSTTPFID---KKPTSAKP------------SSTTPRLS 2066
Cdd:pfam05109  663 STSHMPLLTSAHPTGGenitqVTPASTSthhvstSSPAP-RPGTTSQASgpgNSSTSTKPgevnvtkgtppkNATSPQAP 741

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1879298442 2067 RlATNTSAPDLKNVRSKVGSTENIKHQPG-GGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQK 2131
Cdd:pfam05109  742 S-GQKTAVPTVTSTGGKANSTTGGKHTTGhGARTSTEPTTDYGGDSTTPRTRYNATTYLPPSTSSK 806
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
1821-2075 1.72e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 50.23  E-value: 1.72e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1821 PVVSGTGnditTPPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTigglnkKPMSLASGLVPAAPPKR 1900
Cdd:PRK07003   360 PAVTGGG----APGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAP------KAAAAAAATRAEAPPAA 429

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1901 PAVASA-----RPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLL 1975
Cdd:PRK07003   430 PAPPATadrgdDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPD 509

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1976 PKKPTAIKTEGKPAEVKKMTAKSVPA------------------DLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVKAT 2037
Cdd:PRK07003   510 ARAPAAASREDAPAAAAPPAPEARPPtpaaaapaaraggaaaalDVLRNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAA 589

                          250       260       270
                   ....*....|....*....|....*....|....*...
gi 1879298442 2038 PMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAP 2075
Cdd:PRK07003   590 PRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 1816-2075 2.31e-05

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 49.91  E-value: 2.31e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1816 PEEGRPVVSGTG--NDITTPPNKELPPSPEKKTKPLATTQP--AKTSTSKAKTQPTslPKQPAPT-------------TI 1878
Cdd:pfam05109  532 PNATSPTLGKTSptSAVTTPTPNATSPTPAVTTPTPNATIPtlGKTSPTSAVTTPT--PNATSPTvgetspqanttnhTL 609

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1879 GGLNKKPmslasglVPAAPPKRP--AVASARPSILPSK----DVKPKPIADAKAPEK--RASPSKPASAPASRSGSKSTQ 1950
Cdd:pfam05109  610 GGTSSTP-------VVTSPPKNAtsAVTTGQHNITSSStssmSLRPSSISETLSPSTsdNSTSHMPLLTSAHPTGGENIT 682

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1951 TVAKTTTAAAVASTG-PSSRSPSTLLPKKPTAIKTEGKPAEV--------KKMTAKSVPADLSRPKSTSTSSMKKTTTLS 2021
Cdd:pfam05109  683 QVTPASTSTHHVSTSsPAPRPGTTSQASGPGNSSTSTKPGEVnvtkgtppKNATSPQAPSGQKTAVPTVTSTGGKANSTT 762

                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1879298442 2022 GTAPAAGVvPSRVKATPMPSR--PSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAP 2075
Cdd:pfam05109  763 GGKHTTGH-GARTSTEPTTDYggDSTTPRTRYNATTYLPPSTSSKLRPRWTFTSPP 817
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 1813-2135 2.31e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 49.78  E-value: 2.31e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1813 IARPEEGRPVVSGTGNDITT----PPNKELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSL 1888
Cdd:PHA03307    78 EAPANESRSTPTWSLSTLAPaspaREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGA 157

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1889 ASGLVPAAPPKRPAVA--------SARPSILPSKDVKPKPIADAKAPEKRAsPSKPASAPASRSGSKSTQTVAKTTTAAA 1960
Cdd:PHA03307   158 SPAAVASDAASSRQAAlplsspeeTARAPSSPPAEPPPSTPPAAASPRPPR-RSSPISASASSPAPAPGRSAADDAGASS 236

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1961 VASTGPSSR----SPSTLLPKKPTAiktegkPAEVKKMTAKSVPADLSRPKSTSTSSmkkTTTLSGTAPAAgvVPSRVKA 2036
Cdd:PHA03307   237 SDSSSSESSgcgwGPENECPLPRPA------PITLPTRIWEASGWNGPSSRPGPASS---SSSPRERSPSP--SPSSPGS 305

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 2037 TPMPSRPSTTPFIDKKPTS--AKPSSTTPRLSRLATNTSAPdlknvrskvgSTENIKHQPGGGRAKVEKKTEAAATTRKP 2114
Cdd:PHA03307   306 GPAPSSPRASSSSSSSRESssSSTSSSSESSRGAAVSPGPS----------PSRSPSPSRPPPPADPSSPRKRPRPSRAP 375

                          330       340
                   ....*....|....*....|.
gi 1879298442 2115 ESNAVTKTAGPIASAQKQPAG 2135
Cdd:PHA03307   376 SSPAASAGRPTRRRARAAVAG 396
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 1735-2073 8.73e-05

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 48.15  E-value: 8.73e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1735 QKMTEKSESKTPGEgKKEDKSRMAEPMKGymrpTKSRGLTPLLPKSTIQEQERHKQLKSavclSSSTvyqqlgmsvygia 1814
Cdd:PTZ00449   486 KKLIKKSKKKLAPI-EEEDSDKHDEPPEG----PEASGLPPKAPGDKEGEEGEHEDSKE----SDEP------------- 543

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1815 rPEEGRPVVSGTGNDITTP-PNKELPPS--------PEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPttigglnKKP 1885
Cdd:PTZ00449   544 -KEGGKPGETKEGEVGKKPgPAKEHKPSkiptlskkPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSP-------KLP 615

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1886 MSLAsglVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPA---------------SAPASRSGSKSTQ 1950
Cdd:PTZ00449   616 ELLD---IPKSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKSPKPPKSPKppfdpkfkekfyddyLDAAAKSKETKTT 692

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1951 TVAKTTTAAAVASTGPSS-----RSPSTLLPKKPTAIKTEGKPaeVKKMTAKSV-PADLSRPKSTSTSSMKKTttlSGTA 2024
Cdd:PTZ00449   693 VVLDESFESILKETLPETpgtpfTTPRPLPPKLPRDEEFPFEP--IGDPDAEQPdDIEFFTPPEEERTFFHET---PADT 767

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1879298442 2025 PAAGVVPSRVKA------TPMPSRPSTTPfidKKPT--SAKPSSTTP-------RLSRLATNTS 2073
Cdd:PTZ00449   768 PLPDILAEEFKEedihaeTGEPDEAMKRP---DSPSehEDKPPGDHPslpkkrhRLDGLALSTT 828
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
1872-2134 5.64e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 45.23  E-value: 5.64e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1872 QPAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASAR-------PSILPSKDVKPKPIADA-----KAPEKRASPskPASA 1939
Cdd:PRK07003   359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASavpavtaVTGAAGAALAPKAAAAAaatraEAPPAAPAP--PATA 436

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1940 PASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKmtAKSVPADLSRPKSTSTSSmkkttt 2019
Cdd:PRK07003   437 DRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAF--EPAPRAAAPSAATPAAVP------ 508

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 2020 lsgtAPAAGVVPSRVKATPMPSRPSttpfidkkPTSAKPSSTTPRLSRLATNTSAP--DLKNVRSKVGSTeniKHQPGGG 2097
Cdd:PRK07003   509 ----DARAPAAASREDAPAAAAPPA--------PEARPPTPAAAAPAARAGGAAAAldVLRNAGMRVSSD---RGARAAA 573

                          250       260       270
                   ....*....|....*....|....*....|....*..
gi 1879298442 2098 RAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPA 2134
Cdd:PRK07003   574 AAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPP 610
PHA03378 PHA03378
EBNA-3B; Provisional
 1817-2137 1.64e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 43.90  E-value: 1.64e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1817 EEGRPVVSGTGNDITTPPNK----ELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGL 1892
Cdd:PHA03378   549 ESDEPASTEPVHDQLLPAPGlgplQIQPLTSPTTSQLASSAPSYAQTPWPVPHPSQTPEPPTTQSHIPETSAPRQWPMPL 628

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1893 VP-AAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSP 1971
Cdd:PHA03378   629 RPiPMRPLRMQPITFNVLVFPTPHQPPQVEITPYKPTWTQIGHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPA 708

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1972 STLLPKKPTAIKTEGKPAEVKKMTAKSVPADL---SRPKSTSTSSMKKTTTLSGTAPAAGVVPSRvkATPMPsRPSTTPF 2048
Cdd:PHA03378   709 APPGRAQRPAAATGRARPPAAAPGRARPPAAApgrARPPAAAPGRARPPAAAPGRARPPAAAPGA--PTPQP-PPQAPPA 785

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 2049 IDKKPTSAKPSSTTPRLSRLATNTSAPDLKNVRskvGSTENIKHQPGGGRAKvekktEAAATTRKPESNAVTKTAGPIAS 2128
Cdd:PHA03378   786 PQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQ---GPTKQILRQLLTGGVK-----RGRPSLKKPAALERQAAAGPTPS 857


                   ....*....
gi 1879298442 2129 AQKQPAGKV 2137
Cdd:PHA03378   858 PGSGTSDKI 866
PRK13808 PRK13808
adenylate kinase; Provisional
 1846-1987 6.75e-03

adenylate kinase; Provisional


Pssm-ID: 172341 [Multi-domain]  Cd Length: 333  Bit Score: 41.03  E-value: 6.75e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1846 TKPLATTQPAKTSTSKAKTQPTSLPKQPAPTtigglnKKPMSLASGLVPAAPPKRPAVASARPsilPSKDVKPKPIADAK 1925
Cdd:PRK13808   199 AKKAAKTPAAKSGAKKASAKAKSAAKKVSKK------KAAKTAVSAKKAAKTAAKAAKKAKKT---AKKALKKAAKAVKK 269

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1879298442 1926 APEKraspSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGK 1987
Cdd:PRK13808   270 AAKK----AAKAAAKAAKGAAKATKGKAKAKKKAGKKAAAGSKAKATAKAPKRGAKGKKAKK 327
PHA03247 PHA03247
large tegument protein UL36; Provisional
 1885-2133 9.30e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.46  E-value: 9.30e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1885 PMSLASGLVPAAPPKRPAVASARPSI-----LPSKDV-KPKPIADAKAPEKRASPSKPASAPASRsgskstqtvakttta 1958
Cdd:PHA03247  2512 PSRLAPAILPDEPVGEPVHPRMLTWIrgleeLASDDAgDPPPPLPPAAPPAAPDRSVPPPRPAPR--------------- 2576

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1959 aavaSTGPSSRSPSTL--LPKKPTAIKTEGKPAEVKKMTAKSVPA--DLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRV 2034
Cdd:PHA03247  2577 ----PSEPAVTSRARRpdAPPQSARPRAPVDDRGDPRGPAPPSPLppDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERP 2652

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 2035 KATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLAtntsapdlknVRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKP 2114
Cdd:PHA03247  2653 RDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRA----------ARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLP 2722

                          250
                   ....*....|....*....
gi 1879298442 2115 ESNAVTKTAGPIASAQKQP 2133
Cdd:PHA03247  2723 PGPAAARQASPALPAAPAP 2741
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 1836-2059 9.44e-03

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 41.07  E-value: 9.44e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1836 KELPPSPEKKTKPLATTQPAKTSTSKAKTQPTSL------------PKQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAV 1903
Cdd:PLN03209   337 DGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPlspytayedlkpPTSPIPTPPSSSPASSKSVDAVAKPAEPDVVPSP 416

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1879298442 1904 ASarPSILPSKDVKPKPIADAK--APEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTA 1981
Cdd:PLN03209   417 GS--ASNVPEVEPAQVEAKKTRplSPYARYEDLKPPTSPSPTAPTGVSPSVSSTSSVPAVPDTAPATAATDAAAPPPANM 494

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1879298442 1982 IKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSR-VKATPMPSRPSTTPFIDKKPTSAKPS 2059
Cdd:PLN03209   495 RPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHhAQPKPRPLSPYTMYEDLKPPTSPTPS 573
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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