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Conserved domains on  [gi|398303854|ref|NP_001257693|]
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carbohydrate sulfotransferase 15 isoform 1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Sulfotransfer_3 super family cl21551
Sulfotransferase family;
253-505 4.71e-12

Sulfotransferase family;


The actual alignment was detected with superfamily member pfam00685:

Pssm-ID: 354866  Cd Length: 253  Bit Score: 66.21  E-value: 4.71e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398303854  253 LPHFYIIGQPKCGTTDLYDRLRLHPEV-KFSAIKEPHWWtrkrfgivrlrdGLRDRYPvedYLDLFDLAAHQIHQGLQAS 331
Cdd:pfam00685   1 PDDVLIVTYPKSGTTWLQEILSLIPNRgDFEKFEEPHLF------------NNHNRSP---FLEWYMPSYFDVEEGPVRL 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398303854  332 SAKEqskmntiiigeasastmwdnnawtffydnstdGEPPFLTQDFIHAFQ-----PNARLIVMLRDPVERLYSDYLYFA 406
Cdd:pfam00685  66 NALP--------------------------------SPRIIKTHLPLYLLPksfwdPNAKIIYLVRNPKDVAVSYYHFFR 113
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398303854  407 SSnksaddfheKVTEALQLFENCMLDYSLRACVYnntlnnampvrlqvGLYAVYLLDWLSVFDKQQFLILRLEDHASNVK 486
Cdd:pfam00685 114 MA---------KILKAPGTPEEFVEDFLNGQVNY--------------GSYFDHVKGWWKLRPPGNILFLRYEDLKEDPR 170
                         250
                  ....*....|....*....
gi 398303854  487 YTMHKVFQFLNLgPLSEKQ 505
Cdd:pfam00685 171 GEIKKIAEFLGI-PLTEEE 188
 
Name Accession Description Interval E-value
Sulfotransfer_1 pfam00685
Sulfotransferase domain;
253-505 4.71e-12

Sulfotransferase domain;


Pssm-ID: 334210  Cd Length: 253  Bit Score: 66.21  E-value: 4.71e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398303854  253 LPHFYIIGQPKCGTTDLYDRLRLHPEV-KFSAIKEPHWWtrkrfgivrlrdGLRDRYPvedYLDLFDLAAHQIHQGLQAS 331
Cdd:pfam00685   1 PDDVLIVTYPKSGTTWLQEILSLIPNRgDFEKFEEPHLF------------NNHNRSP---FLEWYMPSYFDVEEGPVRL 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398303854  332 SAKEqskmntiiigeasastmwdnnawtffydnstdGEPPFLTQDFIHAFQ-----PNARLIVMLRDPVERLYSDYLYFA 406
Cdd:pfam00685  66 NALP--------------------------------SPRIIKTHLPLYLLPksfwdPNAKIIYLVRNPKDVAVSYYHFFR 113
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398303854  407 SSnksaddfheKVTEALQLFENCMLDYSLRACVYnntlnnampvrlqvGLYAVYLLDWLSVFDKQQFLILRLEDHASNVK 486
Cdd:pfam00685 114 MA---------KILKAPGTPEEFVEDFLNGQVNY--------------GSYFDHVKGWWKLRPPGNILFLRYEDLKEDPR 170
                         250
                  ....*....|....*....
gi 398303854  487 YTMHKVFQFLNLgPLSEKQ 505
Cdd:pfam00685 171 GEIKKIAEFLGI-PLTEEE 188
 
Name Accession Description Interval E-value
Sulfotransfer_1 pfam00685
Sulfotransferase domain;
253-505 4.71e-12

Sulfotransferase domain;


Pssm-ID: 334210  Cd Length: 253  Bit Score: 66.21  E-value: 4.71e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398303854  253 LPHFYIIGQPKCGTTDLYDRLRLHPEV-KFSAIKEPHWWtrkrfgivrlrdGLRDRYPvedYLDLFDLAAHQIHQGLQAS 331
Cdd:pfam00685   1 PDDVLIVTYPKSGTTWLQEILSLIPNRgDFEKFEEPHLF------------NNHNRSP---FLEWYMPSYFDVEEGPVRL 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398303854  332 SAKEqskmntiiigeasastmwdnnawtffydnstdGEPPFLTQDFIHAFQ-----PNARLIVMLRDPVERLYSDYLYFA 406
Cdd:pfam00685  66 NALP--------------------------------SPRIIKTHLPLYLLPksfwdPNAKIIYLVRNPKDVAVSYYHFFR 113
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398303854  407 SSnksaddfheKVTEALQLFENCMLDYSLRACVYnntlnnampvrlqvGLYAVYLLDWLSVFDKQQFLILRLEDHASNVK 486
Cdd:pfam00685 114 MA---------KILKAPGTPEEFVEDFLNGQVNY--------------GSYFDHVKGWWKLRPPGNILFLRYEDLKEDPR 170
                         250
                  ....*....|....*....
gi 398303854  487 YTMHKVFQFLNLgPLSEKQ 505
Cdd:pfam00685 171 GEIKKIAEFLGI-PLTEEE 188
Sulfotransfer_3 pfam13469
Sulfotransferase family;
256-498 2.30e-07

Sulfotransferase family;


Pssm-ID: 338762  Cd Length: 212  Bit Score: 51.60  E-value: 2.30e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398303854  256 FYIIGQPKCGTTDLYDRLRLHPEVkfsAIKEPHWWTRKRfgIVRLRDGLRDRypVEDYLDLFDLAAHQIHQGLQASSAkE 335
Cdd:pfam13469   2 IFIVGLPRSGTTLLHRLLAAHPQV---RSPEETRFVIPR--LLALRQAWSKS--GVELRRLLDAGLTDEDAEEHPMDA-D 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398303854  336 QSKMNTIIIGEASASTMWDNNAWT-----FFYDNStdgePPFLTQ-DFIHAFQPNARLIVMLRDPVERLYSDYlyfassn 409
Cdd:pfam13469  74 GPEECWQLLRQAFASFILEALARVpsyarWLCDKS----PSHLFYlDLLLRLFPDAKFIHLVRDPVDTVISSY------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 398303854  410 ksaddfhekvteaLQLFENCMLDYSLR-----ACVYNNTLNNAMPVRLQVGlyavylldwlsvfdKQQFLILRLEDHASN 484
Cdd:pfam13469 143 -------------CSLFGFARSSYSDDdgldaLARWYRAYERLMAARARVP--------------PDRFLDVRYEDLVAD 195
                         250
                  ....*....|....
gi 398303854  485 VKYTMHKVFQFLNL 498
Cdd:pfam13469 196 PEGTLRRIYDFLGL 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.17
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
  • Marchler-Bauer A et al. (2015), "CDD: NCBI's conserved domain database.", Nucleic Acids Res.43(D)222-6.
  • Marchler-Bauer A et al. (2011), "CDD: a Conserved Domain Database for the functional annotation of proteins.", Nucleic Acids Res.39(D)225-9.
  • Marchler-Bauer A, Bryant SH (2004), "CD-Search: protein domain annotations on the fly.", Nucleic Acids Res.32(W)327-331.
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