|
Name |
Accession |
Description |
Interval |
E-value |
| MAGE |
pfam01454 |
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide ... |
420-587 |
4.49e-26 |
|
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide variety of tumours but not in normal cells, with the exception of the male germ cells, placenta, and, possibly, cells of the developing embryo. The cellular function of this family is unknown. This family also contains the yeast protein, Nse3. The Nse3 protein is part of the Smc5-6 complex. Nse3 has been demonstrated to be important for meiosis.
:
Pssm-ID: 426270 Cd Length: 205 Bit Score: 106.20 E-value: 4.49e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 420 LVKYLMIKDYKKIPIKRADMLKDVIREYDE-HFPEIIERATYTLEKKFGIHLKEIDKEEHL------------------- 479
Cdd:pfam01454 1 LVRYALACEYQRTPIRREDISKKVLGENRKrLFKKVFEEAQKILRDVFGMELVELPAKEEKkttvtsqqrraaakssrsk 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 480 -YILVCTRDSSARLLGK--TKDTPRLS----------LLLVILGVIFMNGNRASEAVLWEALRKMGLR---PGVRHPFLG 543
Cdd:pfam01454 81 sYILVSTLPPEYRVPAIiwPSKAPSFVldqdeatytgILTVILSLILLSGGSISEQELLRYLRRLGIDtdgTKEIPPLNG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 149274614 544 DLRKLItDDFVKQKYLEYKKIPNSNP--PEYEFLWGLRARHETSKM 587
Cdd:pfam01454 161 NTDDLL-KRLVKQGYLVRTKEGASDDgeEIIEYRVGPRAKVEFGPE 205
|
|
| PRK12323 super family |
cl46901 |
DNA polymerase III subunit gamma/tau; |
138-282 |
1.44e-06 |
|
DNA polymerase III subunit gamma/tau;
The actual alignment was detected with superfamily member PRK14951:
Pssm-ID: 481241 [Multi-domain] Cd Length: 618 Bit Score: 51.64 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 138 ATPQVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAPATSAQSqtgSPAQEAATEGPSSACAFSQAPCA 217
Cdd:PRK14951 370 AEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPP---APVAAPAAAAPAAAPAAAPAAVA 446
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 149274614 218 REVDANRPSTAFLGQNDVFDFTQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQ-------TGPGREVA 282
Cdd:PRK14951 447 LAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDVWHATVQQlaaaeaiTALARELA 518
|
|
| PRK07003 super family |
cl35530 |
DNA polymerase III subunit gamma/tau; |
197-378 |
9.20e-04 |
|
DNA polymerase III subunit gamma/tau;
The actual alignment was detected with superfamily member PRK07003:
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.53 E-value: 9.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 197 AQEAATEGPSSACAFSQAPCAREVDANRPSTAFLGQNDVFDFTQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQTG 276
Cdd:PRK07003 357 AFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATA 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 277 PGREVAATRPKTTKSGkalAKTRWVEPQNVVAAAAAKAKMATSIPEPEGAAAATAQHSAEPWARMGGKRT-KKSKHLDDE 355
Cdd:PRK07003 437 DRGDDAADGDAPVPAK---ANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATpAAVPDARAP 513
|
170 180
....*....|....*....|...
gi 149274614 356 YESSEEERETPAVPPTWRASQPS 378
Cdd:PRK07003 514 AAASREDAPAAAAPPAPEARPPT 536
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MAGE |
pfam01454 |
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide ... |
420-587 |
4.49e-26 |
|
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide variety of tumours but not in normal cells, with the exception of the male germ cells, placenta, and, possibly, cells of the developing embryo. The cellular function of this family is unknown. This family also contains the yeast protein, Nse3. The Nse3 protein is part of the Smc5-6 complex. Nse3 has been demonstrated to be important for meiosis.
Pssm-ID: 426270 Cd Length: 205 Bit Score: 106.20 E-value: 4.49e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 420 LVKYLMIKDYKKIPIKRADMLKDVIREYDE-HFPEIIERATYTLEKKFGIHLKEIDKEEHL------------------- 479
Cdd:pfam01454 1 LVRYALACEYQRTPIRREDISKKVLGENRKrLFKKVFEEAQKILRDVFGMELVELPAKEEKkttvtsqqrraaakssrsk 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 480 -YILVCTRDSSARLLGK--TKDTPRLS----------LLLVILGVIFMNGNRASEAVLWEALRKMGLR---PGVRHPFLG 543
Cdd:pfam01454 81 sYILVSTLPPEYRVPAIiwPSKAPSFVldqdeatytgILTVILSLILLSGGSISEQELLRYLRRLGIDtdgTKEIPPLNG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 149274614 544 DLRKLItDDFVKQKYLEYKKIPNSNP--PEYEFLWGLRARHETSKM 587
Cdd:pfam01454 161 NTDDLL-KRLVKQGYLVRTKEGASDDgeEIIEYRVGPRAKVEFGPE 205
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
138-282 |
1.44e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.64 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 138 ATPQVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAPATSAQSqtgSPAQEAATEGPSSACAFSQAPCA 217
Cdd:PRK14951 370 AEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPP---APVAAPAAAAPAAAPAAAPAAVA 446
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 149274614 218 REVDANRPSTAFLGQNDVFDFTQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQ-------TGPGREVA 282
Cdd:PRK14951 447 LAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDVWHATVQQlaaaeaiTALARELA 518
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
197-378 |
9.20e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.53 E-value: 9.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 197 AQEAATEGPSSACAFSQAPCAREVDANRPSTAFLGQNDVFDFTQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQTG 276
Cdd:PRK07003 357 AFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATA 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 277 PGREVAATRPKTTKSGkalAKTRWVEPQNVVAAAAAKAKMATSIPEPEGAAAATAQHSAEPWARMGGKRT-KKSKHLDDE 355
Cdd:PRK07003 437 DRGDDAADGDAPVPAK---ANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATpAAVPDARAP 513
|
170 180
....*....|....*....|...
gi 149274614 356 YESSEEERETPAVPPTWRASQPS 378
Cdd:PRK07003 514 AAASREDAPAAAAPPAPEARPPT 536
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
134-293 |
6.83e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 39.56 E-value: 6.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 134 SHRVATPQVSGEDTQPTTYAAEAQGPTPEPPLASPQT-----SQMLVTSKMAAPEAPATSAQS--QTGSPAQ-----EAA 201
Cdd:pfam17823 139 SEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPrtaasSTTAASSTTAASSAPTTAASSapATLTPARgistaATA 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 202 TEGPSSACAFSQ----APCAREVDAN----RPSTAFLGQNDVFDFTQPAGVSGMAFPRPKRPAPAQEAATE----GPSAA 269
Cdd:pfam17823 219 TGHPAAGTALAAvgnsSPAAGTVTAAvgtvTPAALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDtmarNPAAP 298
|
170 180
....*....|....*....|....
gi 149274614 270 SGVPQTGPGREVAATRPKTTKSGK 293
Cdd:pfam17823 299 MGAQAQGPIIQVSTDQPVHNTAGE 322
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MAGE |
pfam01454 |
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide ... |
420-587 |
4.49e-26 |
|
MAGE homology domain; The MAGE (melanoma antigen-encoding gene) family are expressed in a wide variety of tumours but not in normal cells, with the exception of the male germ cells, placenta, and, possibly, cells of the developing embryo. The cellular function of this family is unknown. This family also contains the yeast protein, Nse3. The Nse3 protein is part of the Smc5-6 complex. Nse3 has been demonstrated to be important for meiosis.
Pssm-ID: 426270 Cd Length: 205 Bit Score: 106.20 E-value: 4.49e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 420 LVKYLMIKDYKKIPIKRADMLKDVIREYDE-HFPEIIERATYTLEKKFGIHLKEIDKEEHL------------------- 479
Cdd:pfam01454 1 LVRYALACEYQRTPIRREDISKKVLGENRKrLFKKVFEEAQKILRDVFGMELVELPAKEEKkttvtsqqrraaakssrsk 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 480 -YILVCTRDSSARLLGK--TKDTPRLS----------LLLVILGVIFMNGNRASEAVLWEALRKMGLR---PGVRHPFLG 543
Cdd:pfam01454 81 sYILVSTLPPEYRVPAIiwPSKAPSFVldqdeatytgILTVILSLILLSGGSISEQELLRYLRRLGIDtdgTKEIPPLNG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 149274614 544 DLRKLItDDFVKQKYLEYKKIPNSNP--PEYEFLWGLRARHETSKM 587
Cdd:pfam01454 161 NTDDLL-KRLVKQGYLVRTKEGASDDgeEIIEYRVGPRAKVEFGPE 205
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
138-282 |
1.44e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.64 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 138 ATPQVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAPATSAQSqtgSPAQEAATEGPSSACAFSQAPCA 217
Cdd:PRK14951 370 AEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPP---APVAAPAAAAPAAAPAAAPAAVA 446
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 149274614 218 REVDANRPSTAFLGQNDVFDFTQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQ-------TGPGREVA 282
Cdd:PRK14951 447 LAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDVWHATVQQlaaaeaiTALARELA 518
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
132-286 |
1.26e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 48.72 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 132 VASHRVATPQVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAPATSAQSQTGSPAQEAATEGPSSACAF 211
Cdd:PRK12323 433 LAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPA 512
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 149274614 212 SQAPCAREVDANRPSTAFLGQNDVFDFTQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQTGPGR--EVAATRP 286
Cdd:PRK12323 513 QPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDwpALAARLP 589
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
138-399 |
3.15e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.63 E-value: 3.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 138 ATPQVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAPATSAQSQTGSPAQ-EAATEGPSSACAFSQAPC 216
Cdd:PHA03247 2746 AGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADpPAAVLAPAAALPPAASPA 2825
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 217 AREVdanrPSTAflgqndvfdfTQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQTGPGREVAATRPKTTKSGKAlA 296
Cdd:PHA03247 2826 GPLP----PPTS----------AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARP-A 2890
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 297 KTRWVEPQNVVAAAAAKAKMATSIPEPEGAAAATAQHSAEPWARMGGkrtKKSKHLDDEYESSEEERETPAVPPTWRASq 376
Cdd:PHA03247 2891 VSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPP---RPQPPLAPTTDPAGAGEPSGAVPQPWLGA- 2966
|
250 260
....*....|....*....|...
gi 149274614 377 psltvraqLAPRPPMAPRSQIPS 399
Cdd:PHA03247 2967 --------LVPGRVAVPRFRVPQ 2981
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
136-323 |
5.06e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.24 E-value: 5.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 136 RVATPQVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAPATSAQSQTGSPAQE-----------AATEG 204
Cdd:PHA03247 2781 RRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGppppslplggsVAPGG 2860
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 205 PSSACAFSQAPCAREVDANRPSTAFLGQNDVFDFTQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQTG---PGREV 281
Cdd:PHA03247 2861 DVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPpppPPRPQ 2940
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 149274614 282 AATRPKTTKSGKALAKTRWVEPQNVVAAAAAKAKMATSIPEP 323
Cdd:PHA03247 2941 PPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQP 2982
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
140-399 |
1.17e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.64 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 140 PQVSGEDTQPTTyAAEAQGPTPEPPLASPQtsqmlvtskmAAPEAPATSAQSQTGSPAQEAATEGPSSACAfSQAPCARE 219
Cdd:PRK12323 365 PGQSGGGAGPAT-AAAAPVAQPAPAAAAPA----------AAAPAPAAPPAAPAAAPAAAAAARAVAAAPA-RRSPAPEA 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 220 VDANRPSTAflgqndvfdfTQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQTGPGREVAATRPKttksgkalaktr 299
Cdd:PRK12323 433 LAAARQASA----------RGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPA------------ 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 300 wvePQNVVAAAAAKAKMATSIPEPEGAAAATAQHSAEPWARMGGKRTkkskhlDDEYESSEEERETPAVPPTWRASQPsl 379
Cdd:PRK12323 491 ---PADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADP------DDAFETLAPAPAAAPAPRAAAATEP-- 559
|
250 260
....*....|....*....|
gi 149274614 380 tvraQLAPRPPMAPRSQIPS 399
Cdd:PRK12323 560 ----VVAPRPPRASASGLPD 575
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
138-398 |
1.34e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.70 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 138 ATPQVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAPATSAQSQTGSPAQEAATEGPSSACAFSQAPCA 217
Cdd:PHA03247 2699 ADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAG 2778
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 218 REVDANRPSTAflgqndvfdftqPAGVSGMAFPRPKRPAPAQEAATEG----PSAASGVPQTGPGREVAATRPKTTK--S 291
Cdd:PHA03247 2779 PPRRLTRPAVA------------SLSESRESLPSPWDPADPPAAVLAPaaalPPAASPAGPLPPPTSAQPTAPPPPPgpP 2846
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 292 GKALAKTRWVEPQNVVAAAAAKAKMATSIPEPegaaaataqhSAEPWARMGGKRTKKSKHLDDEYESSEEERETPAVPPT 371
Cdd:PHA03247 2847 PPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAP----------ARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPP 2916
|
250 260
....*....|....*....|....*..
gi 149274614 372 WRaSQPSLTVRAQLAPRPPMAPRSQIP 398
Cdd:PHA03247 2917 PQ-PQPQPPPPPQPQPPPPPPPRPQPP 2942
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
129-396 |
1.73e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 1.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 129 SQVVASHRVATPQVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAPATSAQSQTGSPAQEAATEGPSSA 208
Cdd:PHA03247 2669 RLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGP 2748
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 209 CafsqAPCAREVDANRPSTAFLGQNdvfdfTQPAGVSGMAFPRPKRP--APAQEAATEGPSAASGVPQTGPGREVAATRP 286
Cdd:PHA03247 2749 A----TPGGPARPARPPTTAGPPAP-----APPAAPAAGPPRRLTRPavASLSESRESLPSPWDPADPPAAVLAPAAALP 2819
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 287 KTTKSGKALAKTRWVEPqnvvaaaaaKAKMATSIPEPEGAAAATAQHSAEPWARMGGKRTKKSKhlddeyesseeeRETP 366
Cdd:PHA03247 2820 PAASPAGPLPPPTSAQP---------TAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAK------------PAAP 2878
|
250 260 270
....*....|....*....|....*....|
gi 149274614 367 AVPPTWRASQPSLTVRAQLAPRPPMAPRSQ 396
Cdd:PHA03247 2879 ARPPVRRLARPAVSRSTESFALPPDQPERP 2908
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
135-229 |
4.40e-04 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 43.56 E-value: 4.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 135 HRVATPQVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAP-----ATSAQSQTGSPA---QEAATEGPS 206
Cdd:PHA03269 32 HTSAATQKPDPAPAPHQAASRAPDPAVAPTSAASRKPDLAQAPTPAASEKFdpapaPHQAASRAPDPAvapQLAAAPKPD 111
|
90 100
....*....|....*....|...
gi 149274614 207 SACAFSQAPCAREVDANRPSTAF 229
Cdd:PHA03269 112 AAEAFTSAAQAHEAPADAGTSAA 134
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
197-378 |
9.20e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.53 E-value: 9.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 197 AQEAATEGPSSACAFSQAPCAREVDANRPSTAFLGQNDVFDFTQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQTG 276
Cdd:PRK07003 357 AFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATA 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 277 PGREVAATRPKTTKSGkalAKTRWVEPQNVVAAAAAKAKMATSIPEPEGAAAATAQHSAEPWARMGGKRT-KKSKHLDDE 355
Cdd:PRK07003 437 DRGDDAADGDAPVPAK---ANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATpAAVPDARAP 513
|
170 180
....*....|....*....|...
gi 149274614 356 YESSEEERETPAVPPTWRASQPS 378
Cdd:PRK07003 514 AAASREDAPAAAAPPAPEARPPT 536
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
138-292 |
1.57e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.79 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 138 ATPQVSGEDTQPTTYAAEAQGPTPEPPLASPQTSQMLVTSKMAAPEAP-ATSAQSQ---TGSPAQEAATEGPSSACAFSQ 213
Cdd:PRK12323 407 AAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPaAAPAAAArpaAAGPRPVAAAAAAAPARAAPA 486
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 214 APCAREVDANRPSTAFLGQNDVFDFTQ----PAGVSGMAFPRP--KRPAPAQEAATEGPSAASG-VPQTGPGREVAATRP 286
Cdd:PRK12323 487 AAPAPADDDPPPWEELPPEFASPAPAQpdaaPAGWVAESIPDPatADPDDAFETLAPAPAAAPApRAAAATEPVVAPRPP 566
|
....*.
gi 149274614 287 KTTKSG 292
Cdd:PRK12323 567 RASASG 572
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
153-286 |
2.31e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.51 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 153 AAEAQGPTPEPPLASPQTSQmlvTSKMAAPEAPATSAQSQTGSPAQEAAteGPSSACAFSQAPCAREVDANRPSTAFLGQ 232
Cdd:PRK07764 592 PGAAGGEGPPAPASSGPPEE---AARPAAPAAPAAPAAPAPAGAAAAPA--EASAAPAPGVAAPEHHPKHVAVPDASDGG 666
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 149274614 233 NDVFDFTQPAGVSGMAfPRPKRPAPAQEAATEGPSAASGVPQTGPGREVAATRP 286
Cdd:PRK07764 667 DGWPAKAGGAAPAAPP-PAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAA 719
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
133-210 |
2.41e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 40.69 E-value: 2.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 133 ASHRVATPQVSGEDTQP-TTYAAEAQGPTPEP----PLASPQTSQMLVTSKMAAPEAPATSAQSQTGSPAQEAATEGPSS 207
Cdd:PRK10905 152 ATTRPARKQAVIEPKKPqATAKTEPKPVAQTPkrtePAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGG 231
|
...
gi 149274614 208 ACA 210
Cdd:PRK10905 232 KTA 234
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
141-281 |
5.71e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.97 E-value: 5.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 141 QVSGEDTQPTTYAAEAQG--PTPEPPLASPQtsqmlvTSKMAAPEAPATSAQSQTGSPAQEAATEGPSSACAFSQAPCAR 218
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAaaPAAAPAPAAAA------PAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPA 459
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 149274614 219 EVDANRPSTAflgqndvfdftQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQTGPGREV 281
Cdd:PRK07764 460 AAPSAQPAPA-----------PAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
145-401 |
6.10e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 40.08 E-value: 6.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 145 EDTQPTTYAAE----AQGPTPEPPLASPQTSQMLVTSKMAAPEA----PATSAQSQTG-------SPAQEAATEGPSSAC 209
Cdd:PRK08691 376 ELQSPSAQTAEketaAKKPQPRPEAETAQTPVQTASAAAMPSEGktagPVSNQENNDVppwedapDEAQTAAGTAQTSAK 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 210 AFSQAPcarevDANRPSTAFLGQNDVFDFTQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQTGPGrevaatrpktt 289
Cdd:PRK08691 456 SIQTAS-----EAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPNDEAVETETFAHEAPAEPFYG----------- 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 290 ksgkalaktrWVEPQNvvaaaAAKAKMATSIPEPegaaaataqhsaePWARMGGKRTKKSKHLDDEYESSEEERETPAVP 369
Cdd:PRK08691 520 ----------YGFPDN-----DCPPEDGAEIPPP-------------DWEHAAPADTAGGGADEEAEAGGIGGNNTPSAP 571
|
250 260 270
....*....|....*....|....*....|..
gi 149274614 370 PTWRASQPSLTVRAQLAPRPPMAprsQIPSRH 401
Cdd:PRK08691 572 PPEFSTENWAAIVRHFARKLGAA---QMPAQH 600
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
134-293 |
6.83e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 39.56 E-value: 6.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 134 SHRVATPQVSGEDTQPTTYAAEAQGPTPEPPLASPQT-----SQMLVTSKMAAPEAPATSAQS--QTGSPAQ-----EAA 201
Cdd:pfam17823 139 SEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPrtaasSTTAASSTTAASSAPTTAASSapATLTPARgistaATA 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149274614 202 TEGPSSACAFSQ----APCAREVDAN----RPSTAFLGQNDVFDFTQPAGVSGMAFPRPKRPAPAQEAATE----GPSAA 269
Cdd:pfam17823 219 TGHPAAGTALAAvgnsSPAAGTVTAAvgtvTPAALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDtmarNPAAP 298
|
170 180
....*....|....*....|....
gi 149274614 270 SGVPQTGPGREVAATRPKTTKSGK 293
Cdd:pfam17823 299 MGAQAQGPIIQVSTDQPVHNTAGE 322
|
|
| |
